Gene Tpau_3802 details

Gene Information

• Locus tag: Tpau_3802
• ID: 9157982
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3923600
• End bp: 3924394
• Gene Length: 795 bp
• Protein Length: 264 aa
• Translation table: 11
• GC content: 72%
• Product: transcriptional regulator, IclR family
• Protein accession: YP_003648719
• Protein GI: 296141476

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.434289
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCACGA TGCGGCCGGA CGGCTGCCAG ACTCAACGCA TGTGTCCCGC TGAGCGGAAC 
GACGGTGCGG TGGTCATTCG AGCCGCCGCA CTGCTCTGCG CGTACCGTCC GGGTGACGGC 
GCGCTCGGGG TCTCCGAACT CGCTCGCCGC ACCGGCCTAC CGAAGTCCAC CGTTCACCGG 
CTCTCCGGCA ACCTCGTCGA TGCCGGGCTC CTCGAACGTT CGGGCACCGC GCTGCGCCTG 
GGGCTTCGAC TCTTCGAAAT CGGGCAGCTG GCCACCGGAC ACCGCGACCT CGTGGACGCC 
GCTCGGCCCG TCCTCGCAGA CCTCCGCTCC GCCACCCGCA GCACCGTGCA CCTGGCTCGG 
CTCGAAGGCG CCGAAGTCGT GTATTTCGAG GTGCTTCCGG GTCCGGACGC CCCGAACCTG 
CGATCCCGGG TGGGCGGAAG GATGCCCGCC CACGCCACCG GCGTGGGCAA GGCGATCCTG 
GCGTTCGCGG GCGACGATGC CCTCGGTCCG GTTCTCGCCG CCGGACTGCC GCGGCTGAGC 
ACGCGCACCA TCACCTCCCC CGCCCTGCTC AGGAGGCAGC TGCAGCGGAT CCGCGACGAC 
GGGGTGGCGT ACGAGCGCGA GGAATCCGGG AACGGGACGG TGTGTGTGGC GTGCCCGATC 
CTCGACGGCA ACGGCGCGCC GGTCGCTGCC GTCTCCGTGG CGGGCTGGAG CAACCGGATG 
CGTCCCGAGC GCGTGGCTCC GGCGGTCCGC GCTGCGGCGC TCACCCTGTC CCGCGTCGCC 
GGCTCACGGG GATAG 

 

Protein sequence

MPTMRPDGCQ TQRMCPAERN DGAVVIRAAA LLCAYRPGDG ALGVSELARR TGLPKSTVHR 
LSGNLVDAGL LERSGTALRL GLRLFEIGQL ATGHRDLVDA ARPVLADLRS ATRSTVHLAR 
LEGAEVVYFE VLPGPDAPNL RSRVGGRMPA HATGVGKAIL AFAGDDALGP VLAAGLPRLS 
TRTITSPALL RRQLQRIRDD GVAYEREESG NGTVCVACPI LDGNGAPVAA VSVAGWSNRM 
RPERVAPAVR AAALTLSRVA GSRG