| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3720 |
|---|
| Symbol | |
|---|
| ID | 9157900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 3840148 |
|---|
| End bp | 3841158 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
|---|
| Protein accession | YP_003648637 |
|---|
| Protein GI | 296141394 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGCCG TCGGGCATAT CGCTGCGGCG CTCAGCAATC CGGCGTTGAT CCGGGCGCGC
GACGACGGGT ATCTGCTGCG CTTCGAATCG ATGAAGGTGG CATCCGCTCG CGCGGCGCTC
GCGGCGGCGA TCTCGGCGGG GCGGGTGGCG CCGGGCGGCA CCGTCATCGA TTCCTCGTCG
GGGATCTACG CCTACGCTCT CGCGCTGGCC TGCCATGAGG CCGGGATCCG GTGTCGGATA
GTGGGATCGA CCACGATCGA TGAGACACTA CGGCTTCAAC TGATCGCACT GGGCGTCGAC
CTCGAACAGA TGCCGCCGTC CGCCTCTCTC AAGCTGGATC AGGACCGCCG GGTGCAGCGC
ATCCGCGAAT TGCTCGCCGA GAACCCGTCG CTGCACTGGA TGCGGCAGTA CCACGATCCG
GTGCACTATC TCGGGTATCG CGACATCGCT CGCTCGGTCG CGGCCGAACT GACCCGCGCC
GGTGCGGCCT CGGTGCGGTT GGTGGCGCCC GTCGGTTCCG GGGTCTCCAG TGGCGCGCTA
CGTCTGGGCT TCGAGGACGC CGGGCTCACC GTCGAACTGG TGGGCGTGCA GCCCTTCGGC
AGTATCACGT TCGGGTCGGA GCACGTCGAC GACCCGGACA TGCTGATCGC CGGGATCGGA
TCGTCGATCC GGTTCGACAA CGTGCGCCAC AGGCTGTACG ACGTGATCCA CTGGATCTCC
TTCGAGGTGG CCCGTTCCGG TACCCGCGCC CTGCTCTCCG AACACGCGGT GTTCGCCGGA
TTGTCCTCGG GTGCGGGCAT GATCGCGGCC GGCCACGAAC GGATCGCCGA GGACGGACCG
CCCGTGGACG TCACCGTCCA GGTGCTGCCG GATACAGGGC ACCGATACGC ACCGGTGCTG
TCGGGAGAGG TCGGGTCCGT ACCCGCGGGG CCGGCCCTGG TGCAGCGCCC CGAGGATGTG
GTGCTGCCGT GGTCCCGGAT GCGGTGGGCC GGTCGCGCCG CGCCCCGCTA A
|
|---|
| Protein sequence | MKAVGHIAAA LSNPALIRAR DDGYLLRFES MKVASARAAL AAAISAGRVA PGGTVIDSSS
GIYAYALALA CHEAGIRCRI VGSTTIDETL RLQLIALGVD LEQMPPSASL KLDQDRRVQR
IRELLAENPS LHWMRQYHDP VHYLGYRDIA RSVAAELTRA GAASVRLVAP VGSGVSSGAL
RLGFEDAGLT VELVGVQPFG SITFGSEHVD DPDMLIAGIG SSIRFDNVRH RLYDVIHWIS
FEVARSGTRA LLSEHAVFAG LSSGAGMIAA GHERIAEDGP PVDVTVQVLP DTGHRYAPVL
SGEVGSVPAG PALVQRPEDV VLPWSRMRWA GRAAPR
|
|---|
| |