Gene Tpau_3683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3683 
Symbol 
ID9157863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3793863 
End bp3794969 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content75% 
IMG OID 
Productisochorismate synthase 
Protein accessionYP_003648600 
Protein GI296141357 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.790818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATA GGACCGCCGA CGGTGCGCGG CCCCACTTCG TGTTCGCCAC CGGCGGCGCG 
GAGCGGGTGG GCACCGGCGT GGCCGCGGAG TACACCGACC CCCGGGTCGC GGCGGAAGCG
CTGCGCAGCG GGATCGGCCG CGGATCGGGT GCCGTGGTCG GGGCATTGCC CTTCGACCTC
ACCGCACCCG CTGCGCTCAC GGTCCCCGAG GCCCTCAGTA CCCGCCATGC CCCCGACCTC
CCGACGGCGC CGGACCTGCC GGAGCTGCCA GCGCTCACCC AGCTGGCCGA GATCCCCGCA
CCGGACGAGC ACATCGCCCG GGTGCGCCGC GCTGTGGACC TGATCCGCCG CGGTGACCTG
CAGAAGGTGG TGCTGGCACG TGCCGTCGAC TTCGCCGCGG CCGAGCCCAT CGACCCGCTG
ATCCTGGCCG AGGTGCTGCG CTCCCGCGAC GCCAACGGCA ACGGCTTCGC CGTGGACCTG
AGCCCCGCCG GAACCGGCTT CGCCGGCCGC TGGCTGGTGG GCTCGACGCC GGAGATCCTG
GTGCGCCGCG ACGGCGACCG CGTGTCCTGC CATCCCTTCG CCGGTACCGC CACCGAGCCC
GACGGCCTCC TGGAGTCGCC GAAGGATCGC GAGGAACACG CGTACGTGGT CGATGAGATC
GCCGCCGCGC TGGGCCCGCT GTGCACCGCG CTCGACGTGC CGGCGGCACC GTCGGTGAGC
CGCGCCGGGC CCGTGTGGCA CCTGGGCAGC ATGATCGTCG GGCGACTGAA GGACCCGTCG
ATCACCGCCC TCGACCTCGC GCTGGCGTTG CACCCCACGC CCGCGGTGTG CGGTTCCCCC
CGCCTCGCCG CCGCCCGGAC CATCGCCGAG CTCGAGGGCG ACCGGGGCTT CTACGCCGGT
GCCGTCGGAT ACACCACCGC GGACGGTGAC GGGCACTGGC GCGTGACCAT CCGCAGCGCG
GAGCTCGACC CGGCCGGGAC CCGGCTGCGG GCCACCGCGG GCGGCGGCAT CGTGGCCGGG
TCCGAGCCCG ACGCCGAACT CGACGAGACC CGCAACAAGC TGCGCACCGT GCTGGGGCCG
TTTCCGGTCA CCGCGCTCGT GCCTTGA
 
Protein sequence
MTDRTADGAR PHFVFATGGA ERVGTGVAAE YTDPRVAAEA LRSGIGRGSG AVVGALPFDL 
TAPAALTVPE ALSTRHAPDL PTAPDLPELP ALTQLAEIPA PDEHIARVRR AVDLIRRGDL
QKVVLARAVD FAAAEPIDPL ILAEVLRSRD ANGNGFAVDL SPAGTGFAGR WLVGSTPEIL
VRRDGDRVSC HPFAGTATEP DGLLESPKDR EEHAYVVDEI AAALGPLCTA LDVPAAPSVS
RAGPVWHLGS MIVGRLKDPS ITALDLALAL HPTPAVCGSP RLAAARTIAE LEGDRGFYAG
AVGYTTADGD GHWRVTIRSA ELDPAGTRLR ATAGGGIVAG SEPDAELDET RNKLRTVLGP
FPVTALVP