Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3683 |
Symbol | |
ID | 9157863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3793863 |
End bp | 3794969 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | isochorismate synthase |
Protein accession | YP_003648600 |
Protein GI | 296141357 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.790818 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATA GGACCGCCGA CGGTGCGCGG CCCCACTTCG TGTTCGCCAC CGGCGGCGCG GAGCGGGTGG GCACCGGCGT GGCCGCGGAG TACACCGACC CCCGGGTCGC GGCGGAAGCG CTGCGCAGCG GGATCGGCCG CGGATCGGGT GCCGTGGTCG GGGCATTGCC CTTCGACCTC ACCGCACCCG CTGCGCTCAC GGTCCCCGAG GCCCTCAGTA CCCGCCATGC CCCCGACCTC CCGACGGCGC CGGACCTGCC GGAGCTGCCA GCGCTCACCC AGCTGGCCGA GATCCCCGCA CCGGACGAGC ACATCGCCCG GGTGCGCCGC GCTGTGGACC TGATCCGCCG CGGTGACCTG CAGAAGGTGG TGCTGGCACG TGCCGTCGAC TTCGCCGCGG CCGAGCCCAT CGACCCGCTG ATCCTGGCCG AGGTGCTGCG CTCCCGCGAC GCCAACGGCA ACGGCTTCGC CGTGGACCTG AGCCCCGCCG GAACCGGCTT CGCCGGCCGC TGGCTGGTGG GCTCGACGCC GGAGATCCTG GTGCGCCGCG ACGGCGACCG CGTGTCCTGC CATCCCTTCG CCGGTACCGC CACCGAGCCC GACGGCCTCC TGGAGTCGCC GAAGGATCGC GAGGAACACG CGTACGTGGT CGATGAGATC GCCGCCGCGC TGGGCCCGCT GTGCACCGCG CTCGACGTGC CGGCGGCACC GTCGGTGAGC CGCGCCGGGC CCGTGTGGCA CCTGGGCAGC ATGATCGTCG GGCGACTGAA GGACCCGTCG ATCACCGCCC TCGACCTCGC GCTGGCGTTG CACCCCACGC CCGCGGTGTG CGGTTCCCCC CGCCTCGCCG CCGCCCGGAC CATCGCCGAG CTCGAGGGCG ACCGGGGCTT CTACGCCGGT GCCGTCGGAT ACACCACCGC GGACGGTGAC GGGCACTGGC GCGTGACCAT CCGCAGCGCG GAGCTCGACC CGGCCGGGAC CCGGCTGCGG GCCACCGCGG GCGGCGGCAT CGTGGCCGGG TCCGAGCCCG ACGCCGAACT CGACGAGACC CGCAACAAGC TGCGCACCGT GCTGGGGCCG TTTCCGGTCA CCGCGCTCGT GCCTTGA
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Protein sequence | MTDRTADGAR PHFVFATGGA ERVGTGVAAE YTDPRVAAEA LRSGIGRGSG AVVGALPFDL TAPAALTVPE ALSTRHAPDL PTAPDLPELP ALTQLAEIPA PDEHIARVRR AVDLIRRGDL QKVVLARAVD FAAAEPIDPL ILAEVLRSRD ANGNGFAVDL SPAGTGFAGR WLVGSTPEIL VRRDGDRVSC HPFAGTATEP DGLLESPKDR EEHAYVVDEI AAALGPLCTA LDVPAAPSVS RAGPVWHLGS MIVGRLKDPS ITALDLALAL HPTPAVCGSP RLAAARTIAE LEGDRGFYAG AVGYTTADGD GHWRVTIRSA ELDPAGTRLR ATAGGGIVAG SEPDAELDET RNKLRTVLGP FPVTALVP
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