Gene Tpau_3615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3615 
Symbol 
ID9157794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp3730717 
End bp3731364 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content69% 
IMG OID 
Productbeta-lactamase domain protein 
Protein accessionYP_003648532 
Protein GI296141289 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.674887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGA CCCACTTCCG CCATTCCTGC GTCCTCGTGG AGATGTCCGA GACCCGGGTG 
CTCTTCGATC CGGGCAACTT CTCCCACGGC TTCGAGGGGA TCACCGGACT CGACGCGATC 
GTGGTCACCC ACCAGCATCC GGATCACATC GATCCGGCGC GGATCGACGC GCTCGTCGAC 
GCGAATCCGC AGGCTCAGTT GTTCGCCGAC CCCACCACCG CAGCGCAGCG CGGCGGTCGC 
TGGATCGCCG CGGTCCCGGG CCACGACTAC GGCATCGGCA ATCTCATCGC GCGCGCGGTC 
GGTGGCCGGC ACGCGATCAT CCACCCGGAC ATCCCGCAGA TCGACAACAC GTCGTTCCTG 
CTCGGCGACG AGACCCGGCC GGCGCGGTTC TACCACCCGG GCGACGCGCT GCACGTGCCC 
GAGGACGTGC ACGTCGACGT TCTCGGGCTT CCCGTCAGTG CGCCGTGGGC GAAGATCAGC 
GAGACGATCG ACTTCTTCCG CGCGGTCGCG CCGACCGCCG CGGTTCCGAT CCACGACGCG 
CTGCTCTCCG CCGAGGGCGA CGGGATCTAC CTCGGCCGGC TCACCGAGAT GCGGCCCGAC 
GGTGCCGAGG TGGTCCGGGT GGGCACAGAG GAGTCGGCCG ATTTCTAG
 
Protein sequence
MRLTHFRHSC VLVEMSETRV LFDPGNFSHG FEGITGLDAI VVTHQHPDHI DPARIDALVD 
ANPQAQLFAD PTTAAQRGGR WIAAVPGHDY GIGNLIARAV GGRHAIIHPD IPQIDNTSFL 
LGDETRPARF YHPGDALHVP EDVHVDVLGL PVSAPWAKIS ETIDFFRAVA PTAAVPIHDA 
LLSAEGDGIY LGRLTEMRPD GAEVVRVGTE ESADF