Gene Tpau_3565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3565 
Symbol 
ID9157744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp3672732 
End bp3673307 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003648483 
Protein GI296141240 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.534014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTATC ATCACGGAGA CCTGGCGACA GCCCTGGTCG AGGCGGGTCT CGAGGTCACC 
CGCACCGGCG GACCGTCGGC ACTGACCATT CGTGAGGTCA CCCGCCGAGT GGGCGTCAGC 
CCGAACGCCG CCTACCGGCA TTTCCCGGAC CGGCTGGCGC TGCTGCGTGC CGTCAGCGCC 
GCGATCGAAG CACGGATGGC CGGCGCCATG GATGCGATCG GTCACGGTAG CGGCCCGGTC 
GAACGACTGC GCGCGGTGGG GCTGGGCTAC ATCGCCTTCG CGCTCGCCGA ACCCGGCTGG 
TTCTCGGTCT GCTTCTTCGG CGACGAGGCG CCCGCGCCCG ATGCGCTCGC CGGCATCGCG 
CCGTACGCGG CACTTTCCGA CGCCCTCGAT CTCATGGTGC ACGCAGGCCT GCTGCGCCCC 
GAGGATCGCC GGACCGCCAC CTGGAGTTGC TGGTCGATGG TGCACGGATT CGCCGAGATG 
GCGCTCCGCG GACCACTGCA CCATCTCCCC GGCGACGCGC AGTGGCCGCT CGCCGAGGCC 
GCCGTCGACG CCGCGATCGC CGGCATCACC GCCTGA
 
Protein sequence
MAYHHGDLAT ALVEAGLEVT RTGGPSALTI REVTRRVGVS PNAAYRHFPD RLALLRAVSA 
AIEARMAGAM DAIGHGSGPV ERLRAVGLGY IAFALAEPGW FSVCFFGDEA PAPDALAGIA 
PYAALSDALD LMVHAGLLRP EDRRTATWSC WSMVHGFAEM ALRGPLHHLP GDAQWPLAEA 
AVDAAIAGIT A