Gene Tpau_3496 details

Gene Information

• Locus tag: Tpau_3496
• ID: 9157671
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 3608187
• End bp: 3608963
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 11
• GC content: 70%
• Product: ABC-2 type transporter
• Protein accession: YP_003648414
• Protein GI: 296141171

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGCCG ATCACGCGGC ACGTACCGGC CTCAACGCCC GATTCCTGCA GTTGGAGGTC 
CGCCGCCTGC TGCGGAACCG GCAGACTCTG ATTTTCACCC TTGCCCTGCC CGCCGTGCTC 
TACCTGGCGC TGTATAAGCA GCGCTCCGGA TTCGACGCGC AACTCGCGCA CGGCGACTTC 
GCCGCCTGGA TGATGATCGG CATGGCGGTC TACGGCGCCG CGGCCGCCGG TACCACGACC 
GCGGCGGCGG TCTCCGTCGA GCGCTCGGTG GGCTGGATGC GCACGCTGCG CCTGACTCCG 
TTGCGTCCCG AGGCGTACAT CGCCACCAAG ATCGTCAGCT CGATGGCGGT GGCCGCGCTA 
CCGGTGATCG TGGTCGCAGT AGTGGGCGCC GCGACCGGGG CGCATGCGCA GCCGCAGGTG 
TGGGTGCTGT CGCTGCTGGC GGCGTGGATC GGCTCGGCGG TCTTCGCCGC GCTCGGCCTG 
GCGCTCGGTC TCGCCTTCAA GCCCGAGATC GTGCTGCACA TGCCGGGTCT GCTGATGACG 
GCGCTGGCCC TCGCCGGAAA CCTGTTCCTC CCGCTGTCGG GTGCCGCGCT CGCGTTCGCG 
AAGCTCACGC CGATGTACGG GGTGGCGACC CTGGCCAGGT ACCCGCTCAA CGAGGGCGCG 
CAGTTCTCGG GCGAGCACGT CTCCCTCCTG GGAGCGATCG CCAACGTCGC GGTGTGGCTG 
GCGATCTTCG GCGCCGCGGC GGTGGTGTTC TACCGGAGGG GCGGGGGCAG GCAGTAG 

 

Protein sequence

MTADHAARTG LNARFLQLEV RRLLRNRQTL IFTLALPAVL YLALYKQRSG FDAQLAHGDF 
AAWMMIGMAV YGAAAAGTTT AAAVSVERSV GWMRTLRLTP LRPEAYIATK IVSSMAVAAL 
PVIVVAVVGA ATGAHAQPQV WVLSLLAAWI GSAVFAALGL ALGLAFKPEI VLHMPGLLMT 
ALALAGNLFL PLSGAALAFA KLTPMYGVAT LARYPLNEGA QFSGEHVSLL GAIANVAVWL 
AIFGAAAVVF YRRGGGRQ