Gene Tpau_3495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3495 
Symbol 
ID9157670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3607617 
End bp3608150 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content63% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003648413 
Protein GI296141170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCACGAA ATGTCGATGC ATCTCAACGT CGCGCTGAGA TCGACCAGAT CGTTTGGGAG 
ATCATCGCCG ATGAAGGGAT CGCGGCGGTC ACGCTCCGGT CGATCGCCAA TCACGGTGGA 
ATTTCGATGG GACGGGTACA ACATTACTTT CGTTCGCGTG ACGAGATTCT GCGGCATTCT 
CTGGAATCCT TGATCAGGCT CGCCCAGGAT ACGCTCACCG AATCGTCGTC TCCGCGTGAT 
TCGCTCAACC GCCTCCTCAC CCACGCGATT CCTCGTTCGG AAGCGGAAAG GCGGGGATCG 
AAGGTCTGGT ACACGTATCT CGCCGAGGCC ATCACGGACC CGTCCATCAG TGCGATCGTG 
AACACCGTCC TACAGGGCAC GGAGGATCAC GCGACCGCCC TGCTCGACGG CGATCGGATC 
CGCGCCCGCA CCGTGCTCGC GGCCGCGGAC GGGATCGCCT ACCGCACGCT GGTGGGGCAG 
TTGACCCCGG CGCAGGCCGA GGATGCCATC GAGGCCCTGA TCGGTCCCGC GTAG
 
Protein sequence
MPRNVDASQR RAEIDQIVWE IIADEGIAAV TLRSIANHGG ISMGRVQHYF RSRDEILRHS 
LESLIRLAQD TLTESSSPRD SLNRLLTHAI PRSEAERRGS KVWYTYLAEA ITDPSISAIV 
NTVLQGTEDH ATALLDGDRI RARTVLAAAD GIAYRTLVGQ LTPAQAEDAI EALIGPA