Gene Tpau_3494 details

Gene Information

• Locus tag: Tpau_3494
• ID: 9157669
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3606983
• End bp: 3607609
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 65%
• Product: transcriptional regulator, TetR family
• Protein accession: YP_003648412
• Protein GI: 296141169

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGCCAT CGGTGCAATC CCCGGATTCA ATACCGCGCC AGGAACAAAT CATCCAGACG 
GTGATCAGTT TGATCGCCGA ACACGGATAC GCGTACACCT CCTTGCAACG AATCGCGGAT 
GCGGCATCGA TCTCCAAGGC GACCGTTCTC TACCATTTCT CCAACAAGAA CGAACTGGTG 
AGCGCGGCCT ATGACACCGT CCTCGCCGAT CTGACCGGTA GCGTCGGGAA AGCCGTCGCG 
GCCGCGAGTT CGCCCGCGGA TGCGGTGGAG GCGTACGTCA CCTCGATGGT GGGGTACTTC 
GCAACGAGTC CGGAACGCGC TCGGTTCCTC GTGCGGTGGC TCGAGGTCTC GGATTCGGGG 
GTAGGGGTGT CGCGCAACAG CGCCGGCCGC TGGGGCCCCT TGGCGGAACT GATCACCCAG 
GCCCAGAAGA GTGGCCAGTA TTCGCCGTCG ATCGACCCCC GAGCGCACGC AGTCGCCCTC 
GGGGGCGTCG TGGATGCGCT GATCAATGAA TCGCACGCCG ACCCCACGTT CGCCCTCGAC 
GCCTGTACGG CAACACTGCT CTTCTTCACG CGCTCGACCG CTGACGGCCG GGCGCTCGAC 
ACCGATGCGC CGCGTCCGAG CCCGTAG 

 

Protein sequence

MRPSVQSPDS IPRQEQIIQT VISLIAEHGY AYTSLQRIAD AASISKATVL YHFSNKNELV 
SAAYDTVLAD LTGSVGKAVA AASSPADAVE AYVTSMVGYF ATSPERARFL VRWLEVSDSG 
VGVSRNSAGR WGPLAELITQ AQKSGQYSPS IDPRAHAVAL GGVVDALINE SHADPTFALD 
ACTATLLFFT RSTADGRALD TDAPRPSP