Gene Tpau_3462 details

Gene Information

• Locus tag: Tpau_3462
• ID: 9157637
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 3543224
• End bp: 3543889
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 72%
• Product: regulatory protein TetR
• Protein accession: YP_003648382
• Protein GI: 296141139

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0249959
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGCCCA TGGCCGGATC GGTGCGCCGG AGCGAGGCGC TGACCAAGGA CGCGATCGTG 
ACGGCGGCGA TCGAGATCCT CGACCGCGAG GGCGAGACCG GGCTCACGTT CCGAGCGCTC 
GCCACCCGGC TGGAGACCGG CGCCGGCGCG CTGTATCACC ATGTGGCGGG CAAGGACGAG 
TTGCTGGCCG CCGCGGCGGA CCGGGTGATC GGCGCCGTCC TCGCCGAGGC GTCGGACCGG 
GACGATCCCG CAGCGGAAAT CCGGGGATTG GCCCTCGGTC TCTTCGACGC CGTGGACGAG 
CACCCGTGGG TGGGGGCGAG CATGTACCGG GACCCGGCAC AGAACGGTGC GCTGCGCGTC 
TTCGAGGCGC TCGGCAGCCG GATCGTGCGG CTCGGGCTGC CCGACGGTGC GCGGTTCGAC 
GCCGCGACCG CCCTCCTCAA TTACATCGTG GGGGCGGGCG TGCAGAACGC CGCGAATGCG 
CGTGCGTCCG TGGGTGGTCC GAGGCGGGAG GAGCATCTGG GCGCGATGGC GGACCGCTGG 
GACGCGTTGG ACCCCGCCGA GTTCGCCTTC ACCCGCAGTG TGGCCGCACG GCTGCGTGAG 
CACGACGACC GGGAACAGTT CGTGGCCGGG GTGGATCTGA TCCTGGCCGG CGTGCGCGCA 
AGCTGA 

 

Protein sequence

MVPMAGSVRR SEALTKDAIV TAAIEILDRE GETGLTFRAL ATRLETGAGA LYHHVAGKDE 
LLAAAADRVI GAVLAEASDR DDPAAEIRGL ALGLFDAVDE HPWVGASMYR DPAQNGALRV 
FEALGSRIVR LGLPDGARFD AATALLNYIV GAGVQNAANA RASVGGPRRE EHLGAMADRW 
DALDPAEFAF TRSVAARLRE HDDREQFVAG VDLILAGVRA S