Gene Tpau_3415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3415 
Symbol 
ID9157590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3504839 
End bp3506083 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003648338 
Protein GI296141095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.497108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCGG CCACCGTCCC GGCGACGATG CTCGCCGCGC GAGCCGCGGC CGACCCGGGG 
TCGGGTGCGG GCTCGGGTGG AACGGTACCG GGGACCCCGG GAGCGGTGCC GTCGGTTCCC
GCGACCCGGT GGACTCCCGA GCGGGCGCAG CAGTGGCGCG AGCAGGCCGG CTGGATGGTG
GGCTGCAACT TCATCAATGC GAACGCGGGC AACCAGTTCG AGATGTTCCA GGCGCAGACC
TTCGATACCA ACCGGATCAA CACCGAGCTG GCGTGGGCTC GCGGCCTCGG GATGTCGGTG
ATCCGGGTTT TCCTGCAGGA CCAGTTGTGG ACCGCTGACC CCGCCGGGTT CACGCAGCGC
CTGGACACCT TCCTGTCGAT CGCCTCGGCC AATGGCATCC GCACCATGTT CGTGCTGTTC
GACTCCTGTT GGGACCCGAA CCCCAAGCCC GGGGTGCAGC GCGAGCCCAC ACCCGGCGTG
CACAACTCGA CCTGGGTGCA GAGCCCGGGG GCCGCCGGCC TCACCAACGC CGACACCAGT
GCCCTGCAGG CCTATGCCAC CGGTGTGGTC AAGGCCTTCG CGAACGACCC GCGCGTGGTC
GCCTGGGACG TGTGGAACGA GCCGGAGAAC CTCGCGGACT CCTACCCGCT GAGCCCGCCT
GACAAGGTGG CCCGCGTGGC GCAGTTGCTG CCCAAGGCGT TCGAGTGGGC CCGTGCCGGG
AACCCGTCGC AGCCACTCAC CTCCGGCGTG TGGGCCGACA CCCGGCCCGA GATCCGCACG
ATCCAGCTGG AGCAGTCCGA TGTGATCAGC TTCCACAGCT ACGATCCGCC GGAGAAGTTC
CGCTCGATGG CCGCAGACCT CGCCAAGGAG GGGCGCCCGC TGCTGCTCAC CGAGTACATG
GCCCGCGCGC AGGGCAGCAC CATCGAGACC ATCCTGCCGA TCTGCAAGGA ACTGAAGATC
GACGCGATGC AGTGGGGCTT CGTGGCCGGC CGCAGCCAGA CCTACTATCC GTGGGACTCG
TGGAAGCAGC CTTATGTGGG TGCCCGCCAG CCGCGCGAGT GGTTCCACGA CATCCTCTGG
CCCGACGGTA GGCCGTACCG TGACTCCGAG GTCGCGACGA TCCGGCAGCT CACTGCGGGC
ACCACTGCGC CGGCTCCCGC AACCCAGGCG CCCGCGCAGC CCGCGCCACC GCAGCAGCAG
GCCGCCGCCC CGCAGGCGCC ACAGCAGCCG CCCACGGCGC AGTAG
 
Protein sequence
MAAATVPATM LAARAAADPG SGAGSGGTVP GTPGAVPSVP ATRWTPERAQ QWREQAGWMV 
GCNFINANAG NQFEMFQAQT FDTNRINTEL AWARGLGMSV IRVFLQDQLW TADPAGFTQR
LDTFLSIASA NGIRTMFVLF DSCWDPNPKP GVQREPTPGV HNSTWVQSPG AAGLTNADTS
ALQAYATGVV KAFANDPRVV AWDVWNEPEN LADSYPLSPP DKVARVAQLL PKAFEWARAG
NPSQPLTSGV WADTRPEIRT IQLEQSDVIS FHSYDPPEKF RSMAADLAKE GRPLLLTEYM
ARAQGSTIET ILPICKELKI DAMQWGFVAG RSQTYYPWDS WKQPYVGARQ PREWFHDILW
PDGRPYRDSE VATIRQLTAG TTAPAPATQA PAQPAPPQQQ AAAPQAPQQP PTAQ