Gene Tpau_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3406 
Symbol 
ID9157581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3495949 
End bp3496647 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content74% 
IMG OID 
Productputative urease accessory protein 
Protein accessionYP_003648329 
Protein GI296141086 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.540682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCCG CAGCAGTCGC GGTCCGTGCC GCGTCGCCAC GCGCGCACGT CGACCTGGTC 
GGGGGCACGG TCGTGCCCCG GCTGGTGTCG CGTACCCCCG CCGGCGCTCG CATCGCCCTG 
GTGGCCGGCG GCGCACTCCT GCTGCCCGGC GACGAGGTGC GGATCGACAT CACGGTGGGC 
GCCGGCGCGA GCCTGGAGCT CGAGGACATC GGCGGCACCG TCTGTTACGG CGAGGCCGAC 
GGTAGCGGAC CCTGGTCCCG CTGGACGGTG CACGTCAGCG TCGAGGCCGG TGGGCGATTG 
AGGTGGGACG GTTTGCCACT CGTCGTGGCC GACGGTGCGC GGGTGCACCG TCGGACCTGC 
GTGGCGCTCG CCGAGGGCGC GACCGTCGTG CTCCGCGAGA CCAGCGTGCT CGGACGCTCG 
CACGAGCGCG GCGGCGAACT GCGTGCCGAA TTCGTCGCCG AAGACGGGAT GCCCCTGCTC 
GTCGAGGATC TGCGCGTGCG CGGCGAAGCG CCCGAACCCG GCGTCCTCGG TGGGCGCCGC 
GTGTACGACA CCGTGACCGC CCTCGGCTTC CGTCCGCCGG CGGTCCCCGG GCTCGATGTG 
CTCGACCTCG ACCGGCCCGG CACCGTCGCC CGATACCTGG GCGATGAGGC GCACCGGAGC 
CCGCTCGAGG GCGTCACCGC TGCCTGGACA GATGGCTAG
 
Protein sequence
MSAAAVAVRA ASPRAHVDLV GGTVVPRLVS RTPAGARIAL VAGGALLLPG DEVRIDITVG 
AGASLELEDI GGTVCYGEAD GSGPWSRWTV HVSVEAGGRL RWDGLPLVVA DGARVHRRTC 
VALAEGATVV LRETSVLGRS HERGGELRAE FVAEDGMPLL VEDLRVRGEA PEPGVLGGRR 
VYDTVTALGF RPPAVPGLDV LDLDRPGTVA RYLGDEAHRS PLEGVTAAWT DG