Gene Tpau_3354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3354 
Symbol 
ID9157528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3454053 
End bp3454685 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content65% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003648277 
Protein GI296141034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.216649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCCG CGGTGCAGTC GGGCGAGGAG ACCCCCGACG CGAAGGGACG CGCCAAGACC 
CGCCGCAAGC TGATCCGGGC GGCGTACTTC GTGTTCGCGC AGAACGGTTA CGGCGCCACC 
ACGGTGAAGA TGGTGTGCGA TGCCGCCGGA TTCACCCGCG GCGCTTTCTA CTCGAACTTC 
ACCAGCCTCG AGGAACTGTT CATCGAGGTC TGGCGCTACC ACGTGCAATG GATCATGGAT 
GTCATGGCGA AGGTGGTCGA CGCCCACGTG GTCAAGGGCG CCGACTACGG ACAGCTCATC 
GAGATGGCGG TGCGCGCGAT CCCCGTGAAC GAGCGCTGGC AGCGGGTGAA CGGCGATTTC 
GTGGCCCTGT GTACCCGCAC GCCGGAGCTC AACCAGACCG TGCGGGACGC ACAGCAGATG 
TTGCTGGCCA ATATGATTCC CACGGTGATG CACGTGCTGG AGGCCGCGGG CCGCAGGGTG 
ACCGCGCCCG AGGCTCTGGG GTATGCGTTG CTCGCCGTGC ACGAGGGCAC CGCCAGTTAC 
TGCGTCATCG ATCCGGACAA CGAGACGCTC AAGCAGAACC GGATCGATCT GCTCACCGCC 
ACCCTGAACA TGTACAGCGA GCCGATCGCT TGA
 
Protein sequence
MTAAVQSGEE TPDAKGRAKT RRKLIRAAYF VFAQNGYGAT TVKMVCDAAG FTRGAFYSNF 
TSLEELFIEV WRYHVQWIMD VMAKVVDAHV VKGADYGQLI EMAVRAIPVN ERWQRVNGDF 
VALCTRTPEL NQTVRDAQQM LLANMIPTVM HVLEAAGRRV TAPEALGYAL LAVHEGTASY 
CVIDPDNETL KQNRIDLLTA TLNMYSEPIA