Gene Tpau_3351 details

Gene Information

• Locus tag: Tpau_3351
• ID: 9157525
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3451667
• End bp: 3452347
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 73%
• Product: Helix-turn-helix, AraC domain protein
• Protein accession: YP_003648274
• Protein GI: 296141031

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGAACC GGGCCGGGAG CGGCTGGACC GGCTCGGTGC ACCTCGGCGT GGGCGCCCTC 
GCCTACGACG GAGCCGTGGG CTCCACCGGC CGGCACCGGC ATGCGGCGTG GCAGTTGCTG 
GCCCTGCGGA CCGGTACCGT GACCGTCACC GTCTGGCCGT CCGACGGTCC GCCGATCGTC 
CGGGATGGCC TGACCGCCTT CGTGATTCCG GCCGGTACGG AGCACGCGAT CGGACCGGTC 
GCACCGGACG CCGCCGGATT CACCGTGTAT CTCGATCCCG ATGCCGTTCC GGTCACCCTG 
CCGGAGGAGC CCACCGCAGC GGAGCTGCAC GCGCTCGCGA CCGCGCACGA CGGCCTGCGG 
CCCGTCCATC CGTACGTGCG ATCGGCGCTG GACGCGGTGG CGCGGCGCCG ATCCGAGGCG 
CTGTCGTTGA CCGAGGTCGC CGCTGAGATC GGCGTATCGC CCTCGCATCT GAGCCGGCTG 
TGGCGGCGCG ATCTGGGCCT CGCCTTCCCG GCGTGGGTGC GATGGTCGCG GCTGCGCGAT 
ATGGCCGACC GGGTGCAGGG CGGGGCGTCG ATCACCGATG CCGCCCATGC GGCGGGCTTC 
GCCGACGGTG CGCACGCGAG CCGGGTATGC CGAGAGATGT TCGGGCTCTC ACCACAGCAG 
TTACTCGCCG CACTCGGCTG A 

 

Protein sequence

MRNRAGSGWT GSVHLGVGAL AYDGAVGSTG RHRHAAWQLL ALRTGTVTVT VWPSDGPPIV 
RDGLTAFVIP AGTEHAIGPV APDAAGFTVY LDPDAVPVTL PEEPTAAELH ALATAHDGLR 
PVHPYVRSAL DAVARRRSEA LSLTEVAAEI GVSPSHLSRL WRRDLGLAFP AWVRWSRLRD 
MADRVQGGAS ITDAAHAAGF ADGAHASRVC REMFGLSPQQ LLAALG