Gene Tpau_3287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3287 
Symbol 
ID9157461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3383636 
End bp3384301 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content70% 
IMG OID 
Productprotein of unknown function UPF0126 
Protein accessionYP_003648211 
Protein GI296140968 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.375068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTGCTCG CCGTGCTGAA CTACGCGGGG ATCGCGGTCT TCGCCGCATC CGGCGCGCTG 
ATCGGTGTGC GCAAGCGGCT GGACCTGTTC GGTGTATGGA CGGTGGCCGC GCTCACCGGC 
GTCGGCGGTG GCGTGGCCCG CGACCTCCTG CTCGGCATCA CCCCACCTGC CTCCTTCCAG 
GGCTGGGAGA ATCTCACCGT GGCGACGGTG GCCGCGGCCT TCGTCTTCGT CTTCCACCCG 
CAGTTCGGGC GGCTGAAGAA TTCGGTGCTG GTGCTCGACG CGATCGGCAT GGGCGTTTTC 
GCCGCCACCG GCGCGCTCAC CGCGCTGCAC AACGACGCCA GCCCGTTCGC CTCGGCGCTG 
ATCGGCATCA CCACCGCGCT CGGCGGCGGT GTGCTGCGCG ACATCCTGGT CAACGAGGTT 
CCGCTGCTCA TTCAAGAGCG CGATCTCTAT GCCATTCCGG CTCTCACCGG TGCCTTCGCC 
ACGGTGCTCG CTTCGGAGTG GGGCGCCACC GACGCTCGGT CGTTGGTGGT GGGCAGTGTG 
CTCGCCTCCG GGTTCCGGCT GGTCGCGCTG TGGCAGGGCT GGCGGGTGCC GGTCGCGCCG 
GAGGATGTGG CCGGTCGTTT CGGGCGTGCC TGTCGTCGTG GCTTGCGGTT CCGGCGCCGC 
CCGTGA
 
Protein sequence
MLLAVLNYAG IAVFAASGAL IGVRKRLDLF GVWTVAALTG VGGGVARDLL LGITPPASFQ 
GWENLTVATV AAAFVFVFHP QFGRLKNSVL VLDAIGMGVF AATGALTALH NDASPFASAL 
IGITTALGGG VLRDILVNEV PLLIQERDLY AIPALTGAFA TVLASEWGAT DARSLVVGSV 
LASGFRLVAL WQGWRVPVAP EDVAGRFGRA CRRGLRFRRR P