Gene Tpau_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3230 
Symbol 
ID9157403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp3330872 
End bp3331558 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003648154 
Protein GI296140911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTTCTGG CGGACCTCGC CACCAGTTTC ACGGTGGGCT CGGGATCGAA GGCGCAGGAA 
CTCACGCCCT CGCAGCTGCT CGAACGCCTC GGCTTCGCCG CGGCGCAACT CTCGACGCCG 
GTCAAGGACC TCTCGGGCGG GCAGAAGCGC CGACTACAGC TGCTACTGAT CCTGCTCGAC 
CAGCCGAACG TGCTCATCCT CGACGAGCCG ACCAACGACC TGGACACCGA CATGCTGGCC 
GCGATGGAGG ACCTGCTGGA CTCGTGGCCC GGCACGCTGA TCGTGGTGAG CCACGACCGG 
TACTTCCTGG AGCGGGTGAC CGATCAGCAG TACGCGATCC TCGACCGACG GCTGCGGCAC 
CTGCCGGGCG GCGTCGACGA GTACCTCGCG CTGCGTCGCG CACAGCAGAA CACGGTGTCG 
GCCGCGGCCG CGGCACCCGC GGAGAAGGCG CCGTCGGGCC TGAGCGGCGC CGAGCTGCGC 
GCGGCCCAGA AGGAAGTCAC CTCGGTCGAG CGCCGGATGG CCAAGCTCAC CGAGCAGATC 
GACCGGGCGA AGATCGCGCT CGCCGATCAC GACCAGGGCG ACTACGCCGG TCTCGCCGAC 
GAGATGAAGA AGATCGCCGC GCTGGAGGAC GAGCTGGCCG ATCAGGAGAC CCGCTGGTTC 
GAGCTCACCG AGGCGCTCGA CGCCTGA
 
Protein sequence
MVLADLATSF TVGSGSKAQE LTPSQLLERL GFAAAQLSTP VKDLSGGQKR RLQLLLILLD 
QPNVLILDEP TNDLDTDMLA AMEDLLDSWP GTLIVVSHDR YFLERVTDQQ YAILDRRLRH 
LPGGVDEYLA LRRAQQNTVS AAAAAPAEKA PSGLSGAELR AAQKEVTSVE RRMAKLTEQI 
DRAKIALADH DQGDYAGLAD EMKKIAALED ELADQETRWF ELTEALDA