Gene Tpau_3184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3184 
Symbol 
ID9157356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3289061 
End bp3289612 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003648110 
Protein GI296140867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAGTG TGCCGATCCT CGCCATCGCC GCCGGTATCC AGCGCGAGCG CACCCGCGCC 
GGCTGGAGCA TGGCCGAACT CGCCCGCCGC GCGAACATCG CCAAATCGAC TCTGTCGCAA
CTCGAGGCGG GTACCGGAAA CCCCAGCGTC GAGACGCTCT GGGCGCTCGC GACCGCGCTC
GAGATCCCCT TCGCTCAGCT ACTCGGCGGC GGGAACGTCG AGGTCACGGT GGTGCGTGCG
GGCGAAGGCG CGACCGTGCC GTCCGATTCG GCCGATTACG CCGCCACCCT GCTCACCGTC
TCCCCACCCG GAATCCGCCG GGACATGTAC CGCATCGACG CCGAACCGGG GTCGCGCCGG
GAATCGGCGG CGCACGTGCT CGGCACCGTC GAGCACGTGC TGTTGTGTAG CGGCGAGGCG
CGCGTGGGGC CCCTCGATCA GCCGGTCACG CTCGCCCCGG GCGACTTCAT GACCTATCCC
GGCGATGCGC CGCACGTCTT CGAGGCCCTC GCTCCGGGAA CCCGCGCGGT GTTGATCAGC
GACCAGCGCT GA
 
Protein sequence
MSSVPILAIA AGIQRERTRA GWSMAELARR ANIAKSTLSQ LEAGTGNPSV ETLWALATAL 
EIPFAQLLGG GNVEVTVVRA GEGATVPSDS ADYAATLLTV SPPGIRRDMY RIDAEPGSRR
ESAAHVLGTV EHVLLCSGEA RVGPLDQPVT LAPGDFMTYP GDAPHVFEAL APGTRAVLIS
DQR