Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3183 |
Symbol | |
ID | 9157355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 3288415 |
End bp | 3289077 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003648109 |
Protein GI | 296140866 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCACCG CGAAGCCGCG CAAGCGAATG ACGGCCGCGG AGCGCCGCAG TCAGCTGGTG GACACCGCCC GTTCGGTATT CGCCGACCGC GGCTATGCGG CCGCCACGAT CGAGGAGGTC GCCGCGAAGG CGGAGGTCTC GAAGCCCGTG GTGTACGAGC ACTTCGGCGG CAAAGAGGGG CTGTACGCGG TGGTCGTCGA TCGCGAGATG GAGATGGTTC TCGAGGTGTT CTCCCGCGCC ATGCTCGAGG ATCGGTCGAA GTCACGGATC GAGCAGATCG CGCTGGCGCT GCTCACCTAC GTCGAGGAAC GTTCGGATGG TTTCCGCATC CTCACCCGCA ACAGCTCCGT CGAGCATGCG GGCGGCTACT CGACTCTGCT GAACGACCTG GTGAGCCAGG TGGAGGTGAA CCTCGAGGGC GAGTTCGTCG AGCGCGGATT CGACCGCGAG TTGGCGCCGC TGTACGCGCA GGCGCTCGTG GGGATGGTCG CGATGACGGC CCAGTGGTGG CTGGAGGTGC GCCATCCTCC GAAGGAGGTG GTGGCAGCGC ACATCGTGAA TCTGTCCTGG TACGGCCTGG CGGGGTTGAA GGACAACCCG GTGGCGATCG AGCTGAGCCC GCTGGCCCCG ATCGCCGACG CGGATGTCAG CGCTGGTCGC TGA
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Protein sequence | MTTAKPRKRM TAAERRSQLV DTARSVFADR GYAAATIEEV AAKAEVSKPV VYEHFGGKEG LYAVVVDREM EMVLEVFSRA MLEDRSKSRI EQIALALLTY VEERSDGFRI LTRNSSVEHA GGYSTLLNDL VSQVEVNLEG EFVERGFDRE LAPLYAQALV GMVAMTAQWW LEVRHPPKEV VAAHIVNLSW YGLAGLKDNP VAIELSPLAP IADADVSAGR
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