| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3130 |
|---|
| Symbol | |
|---|
| ID | 9157301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 3239098 |
|---|
| End bp | 3240396 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Glycine hydroxymethyltransferase |
|---|
| Protein accession | YP_003648056 |
|---|
| Protein GI | 296140813 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACT CCAGCGTGAA CACAGCGTCC CTCGCCGAAC TCGATCCCGA GGTCGCAGCC
GCCATGAACG GCGAGCTGGC ACGCCAGCGC GACACGCTGG AGATGATCGC CTCGGAGAAC
TTCGTACCGC GCGCCGTGCT GCAGGCGCAG GGCTCCGTGC TCACCAACAA GTACGCCGAG
GGCTACCCGG GGCGTCGTTA CTACGGTGGC TGCGAATACG TCGACGTGGT CGAGGATCTG
GCCCGCAACC GTGCCAAGGA GTTGTTCGGC GCCGAGTTCG CCAACGTCCA GCCGCACGCC
GGTGCACAGG CCAATGCGGC CGTCCTGCAG GCATTGATGG AGCCCGGCGA GACCCTGATG
GGCCTCGACT TGGCGCACGG TGGCCACCTC ACCCACGGCA TGCGCCTGAA CTTCTCCGGC
AAGCTCTACG AGAACGTTTT CTACGGCGTC TCGAAGGAGG ACCACCGGGT CGATATGGAC
GAGGTGCGCA AGATCGCCCT CGATTCCAAG CCCAAGGTGA TCGTCGCCGG CTGGTCCGCC
TACCCGCGGC ACCTCGACTT CGCCGCGTTC CGGTCGATCG CCGACGAGGT GGGCGCGCAC
CTGTGGGTCG ATATGGCGCA CTTCGCGGGC CTCGTCGCCG CAGGTCTGCA CCCGAGCCCC
GTCCCGCACG CCGATGTGGT CAGCTCGACC GTGCACAAGA CCCTCGGCGG CCCCCGCTCG
GGCATCATCC TGGCGAAGCA GGAGTGGGCC AAGAAGCTCA ACTCCGCGGT CTTCCCCGGC
CAGCAGGGCG GTCCGCTGAT GCACGTGATC GCGGCCAAGG CCGTGGCGCT CAAGGTCGCC
GGTACCGAGG AGTTCCGCGA GAAGCAGCAG CGCACTCTCG AGGGCGCGAA GATCCTCGCT
GAGCGGCTCA CCGCACAGGA CGTGGCCGAC GCCGGCGTCA CCGTGCTCAC CGGCGGCACC
GACGTGCACT TGGTGCTCGT CGATCTGCGC AACAGCGATC TCGACGGACA ACAGGCCGAG
GATCTGCTGC ACGAGGTGGG GATCACGGTC AACCGCAACG CCGTGCCCTT CGATCCGCGT
CCGCCGATGG TCACCTCCGG CCTGCGGATC GGTACCGCAG CGCTCGCGAG CCGTGGCTTC
GGCGCCGCCG AGTTCACCGA GGTCGCCGAC ATCATCGGAA CCGCGCTGGC GCTGGGGAAG
GCCGCCGACC TGTCGGCGCT GCGCGCCCGC GTCTCGGCGC TCGCACTGGA GGTGCCGCTG
TACGACGGCC TGGAGGACTG GGGCCTGCTG TCGCGCTGA
|
|---|
| Protein sequence | MSDSSVNTAS LAELDPEVAA AMNGELARQR DTLEMIASEN FVPRAVLQAQ GSVLTNKYAE
GYPGRRYYGG CEYVDVVEDL ARNRAKELFG AEFANVQPHA GAQANAAVLQ ALMEPGETLM
GLDLAHGGHL THGMRLNFSG KLYENVFYGV SKEDHRVDMD EVRKIALDSK PKVIVAGWSA
YPRHLDFAAF RSIADEVGAH LWVDMAHFAG LVAAGLHPSP VPHADVVSST VHKTLGGPRS
GIILAKQEWA KKLNSAVFPG QQGGPLMHVI AAKAVALKVA GTEEFREKQQ RTLEGAKILA
ERLTAQDVAD AGVTVLTGGT DVHLVLVDLR NSDLDGQQAE DLLHEVGITV NRNAVPFDPR
PPMVTSGLRI GTAALASRGF GAAEFTEVAD IIGTALALGK AADLSALRAR VSALALEVPL
YDGLEDWGLL SR
|
|---|
| |