| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3120 |
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| Symbol | |
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| ID | 9157291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 3229152 |
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| End bp | 3230570 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | fumarate lyase |
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| Protein accession | YP_003648046 |
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| Protein GI | 296140803 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000941956 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAGA ACGATGGTTC GCCGCAGGGC GAGTTCCGGA TCGAGCACGA CACGATGGGC
GAGGTGCGGG TCCCCGCAGC CGCTCTCTGG CGCGCGCAGA CCCAGCGCGC CGTGGAGAAC
TTCCCGATCA GCTTCCGTCC GCTCGAACGC CCCCAGATCC GCGCCATGGG GCTGCTCAAA
GCCGCATGCG CTCAGGTCAA CAAGGATCTC GGTTTGCTCG CGCCGGACAA GGCCGACGCC
ATCATCGCGG CCGCCCAGGA GATCGCCGAC GGCCGCCACG ACGACCAGTT CCCGATCGAT
GTCTTCCAGA CCGGTTCCGG CACCAGTTCC AATATGAACA CCAACGAGGT GATCGCCTCG
ATCGCGGCGG GGCACGGCGT CACGGTGCAT CCGAACGACG ATGTGAACAT GTCGCAGAGC
AGCAACGACA CCTTTCCCAC CGCAACGCAC GTCGCTGCGA CCGAGGCTGC GGTCACGGGC
TTGATCCCCG CGTTGGAGCA GCTGCACGCC GCGCTCGCCG AGAAGGCCGA GCAGTGGCGC
ACCGTGGTGA AGTCGGGCCG GACCCACTTG ATGGATGCCG TCCCGGTCAC GCTCGGCCAG
GAGTTCGGCG GCTACGCCCG GCAGGTCGAG GCCGGCATCG AGCGGGTACG CGCCTGCCTG
CCCCGCGTCG GTGAGGTCCC GATCGGCGGC ACCGCCGTGG GCACCGGGCT CAACGCCCCC
GACCGGTTCG GTTCGCTGGT GGTGGCCGAA CTGGTCCGCC TGACCGGGGT GCAGGACATC
CGGCTGGCGA AGGACAATTT CGAAGCACAG GCCGCCCGCG ACGGACTGGT GGAGCTCTCG
GGTGCGCTGC GCACCGTCGC GATCTCGCTG ACCAAGATCG CCAACGACGT GCGATGGATG
GGTTCGGGGC CGCTCACCGG TCTCGGCGAG ATCGCACTCC CCGATCTGCA GCCCGGAAGC
TCGATCATGC CCGGGAAGGT CAATCCGGTT CTGCCCGAAG CGGTCACGCA GGTGGCGGCG
CAGGTGATCG GCAATGATGC CGCGGTCGCC TGGGGCGGGG GTAACGGCGC CTTCGAACTC
AATGTGTACA TCCCGATGAT GGCGCGCAAC GTGCTGGAAT CGGTGAAGCT GCTCACCAAC
GTCTCGGTCC TGTTCGCGGA CAAGTGCATC GCCGGGCTCG AGGCGCACGA GGAACGGCTG
CGCACGCTGG CCGAATCGTC GCCGTCGATC GTGACGCCAC TGAATTCGGC GATCGGCTAC
GAAGAAGCGG CGGCCGTGGC CAAGCAGGCA CTCAAGGACG GCACGACGAT CCGGCAGGCG
GTGATCGACC GCGGGTTGAT CGGCGATGCG CTCTCCGTCG ACGAACTCGA TAAGCGGCTG
GACGTGCTGA AGATGGCGAA CCTGGACCGG AAGCGCTGA
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| Protein sequence | MAKNDGSPQG EFRIEHDTMG EVRVPAAALW RAQTQRAVEN FPISFRPLER PQIRAMGLLK
AACAQVNKDL GLLAPDKADA IIAAAQEIAD GRHDDQFPID VFQTGSGTSS NMNTNEVIAS
IAAGHGVTVH PNDDVNMSQS SNDTFPTATH VAATEAAVTG LIPALEQLHA ALAEKAEQWR
TVVKSGRTHL MDAVPVTLGQ EFGGYARQVE AGIERVRACL PRVGEVPIGG TAVGTGLNAP
DRFGSLVVAE LVRLTGVQDI RLAKDNFEAQ AARDGLVELS GALRTVAISL TKIANDVRWM
GSGPLTGLGE IALPDLQPGS SIMPGKVNPV LPEAVTQVAA QVIGNDAAVA WGGGNGAFEL
NVYIPMMARN VLESVKLLTN VSVLFADKCI AGLEAHEERL RTLAESSPSI VTPLNSAIGY
EEAAAVAKQA LKDGTTIRQA VIDRGLIGDA LSVDELDKRL DVLKMANLDR KR
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