| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3111 |
|---|
| Symbol | |
|---|
| ID | 9157282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3221502 |
|---|
| End bp | 3222587 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF195 |
|---|
| Protein accession | YP_003648038 |
|---|
| Protein GI | 296140795 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.294839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTCC TCAGCCTGCT CGTCGCGCTC CTGGCGCTGC TGGTCGGCCT CGCCGCCGGG
GTGATCCTGG CGCGGTACCT GCCGGCCCGG CCGGCACGGG GGGACGGTGG TCCGCCGGCA
CCCGAGGCGA TCGCCGGCCC GGTCGGCGCC ATGCTCGCCC CGCTCCGGCA GACGCTCGAC
GCCCTCGGTC ACGAGTTCGC CGTCGCCGAG CGCAGCAGGG TCGCGGCCTT CGCCGGGCTG
CGGGAGCAGA TCGGCACGGT CGCCCGCACC AGCGAGGCAC TGCGCGCCGA GACGGCCACG
CTGCGCTCGG CCATGAAGTC GTCGACGGTG CGCGGTCGCT GGGGTGAGCT CCAACTGGAA
CGGGTGGTCG AGCTGGCGGG ACTGAGCCGG CACTGCGACT TCTCCACCCA GGTCGCGGGC
GTGGTCGGCG ATGATCGCGT GCGCCCCGAT GTAGTGGTGC ATCTTGCGGG CGGCCGCGAT
CTGGTGGTCG ATGCGAAGGT GCCTCTCGAC GCCTATCTCC AGGTGCTGGA GGCACCACCC
GCCGAGCATG CGGCGCTGCT CGCCGATCAT GCCCGCCGGT TCCGGTCGCA CGTCGTGCAG
CTCGCGGGCA GGCGGTACTG GGACGCCGTC GGCTCGCCCG AGCTGGTGGT GATGTTCGTC
CCCGCCGAGG CCTTCCTCGA CGCCGCACTG CAGGTAGACC CGGATCTGCT GGAATTCGCA
TTGAACCGCA ATGTGGTGCT CGCCACACCT ACCACGCTCG TCGCGATGCT GCGCGCGGTG
GCGCTGGCCT GGCGCCAGCA CGCCCTCGGC GAGGACGCCG AACGGATCCA CGCGCTCGGC
CGTGAGCTCA GCGAGCGCCT GGATGTGCTC AACAACCACT TCAGCTCCCT CGGATCCGCC
CTGACCAGGG CTGTCGATGC GTTCAACACC ACCGTCGGCT CCTACAACGC CAGGGTGGGC
GTCACGGCCC GCCGGCTGGC GGACCTGGCG TCCATGCCCG ACGGTGCGCG CGATGATCAT
CCAGGGCTCG ACGCTGCGCC GCGCGCAGTC CCACACGGTG CGCATTCTCG GATCTCACAG
CCGTAG
|
|---|
| Protein sequence | MDLLSLLVAL LALLVGLAAG VILARYLPAR PARGDGGPPA PEAIAGPVGA MLAPLRQTLD
ALGHEFAVAE RSRVAAFAGL REQIGTVART SEALRAETAT LRSAMKSSTV RGRWGELQLE
RVVELAGLSR HCDFSTQVAG VVGDDRVRPD VVVHLAGGRD LVVDAKVPLD AYLQVLEAPP
AEHAALLADH ARRFRSHVVQ LAGRRYWDAV GSPELVVMFV PAEAFLDAAL QVDPDLLEFA
LNRNVVLATP TTLVAMLRAV ALAWRQHALG EDAERIHALG RELSERLDVL NNHFSSLGSA
LTRAVDAFNT TVGSYNARVG VTARRLADLA SMPDGARDDH PGLDAAPRAV PHGAHSRISQ
P
|
|---|
| |