Gene Tpau_3100 details

Gene Information

• Locus tag: Tpau_3100
• ID: 9157271
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3208717
• End bp: 3209289
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 66%
• Product: protein of unknown function DUF218
• Protein accession: YP_003648029
• Protein GI: 296140786

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGTGC TCATCGTCAT CGTCGCGGCA TCCAGTACGT GGGTGCAGTG GGAGAGCCGT 
TCGCGGATCG ATCAGAACGC CTCCCGCGAC TGGGTGATCG TGTTGGGCGA TCGCGTGGTC 
GATGGAGAGC CGTCGGTGTA CCTGCGGGAA CGCCTCGACA CCGCGCTCGC TGTTCTGCGC 
GAGAACCGCG CCCGACGCGC ACTGGTGTCG GGGCACGCCG CATCGACGAA GGGCGACGAG 
GTCGCCGCGA TGCGCACCTA CTTGATCCAG CACGGCGTGG ATCCAGGGAA GATCACCGAC 
GACCGCTTCG GCGTGACGAC CTACAACACC TGCGCCCGCG CCAGGACGGT GTTCGGAATC 
GACTCGGCGA TTCTCGTGAC GCAAGACTTC CATCTGCGGC GCGCGGTCGC ATTGTGTCGC 
GCAGAGGGCA TCGATGCCGC GGGTATCGAG GCGGATTCGG ACGCCGGGGT CTACCTGACG 
GTGCGGAACT GGGTTCGAGA GATCGGACTG TCGCGCCCGA AAGCCGCGCT CGACGTCCTC 
CGCGATCCCG GCCCGCAGAC CAGCGATCGT TGA 

 

Protein sequence

MIVLIVIVAA SSTWVQWESR SRIDQNASRD WVIVLGDRVV DGEPSVYLRE RLDTALAVLR 
ENRARRALVS GHAASTKGDE VAAMRTYLIQ HGVDPGKITD DRFGVTTYNT CARARTVFGI 
DSAILVTQDF HLRRAVALCR AEGIDAAGIE ADSDAGVYLT VRNWVREIGL SRPKAALDVL 
RDPGPQTSDR