Gene Tpau_3072 details

Gene Information

• Locus tag: Tpau_3072
• ID: 9157243
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3187602
• End bp: 3188366
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 70%
• Product: ABC transporter related protein
• Protein accession: YP_003648003
• Protein GI: 296140760

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0146986
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACTC CCGCGCCACC CGCCCTGCTC CTGCAGGACC TCTACCTCGC CTTCGGGAAC 
AAGGAGGCGG TGTCGGGCGT GTCACTGTGG GTGCCGCAGG GATCGATGTT CGGCCTGGTG 
GGACCGAACG GCGCGGGCAA GACCACGTCG CTGTCGATGG CCGTGGGCCT ACTGCGGCCG 
GGCCGTGGGC GGAGTCTGGT GTTCGGCGTG GACGTGTGGG GCGATCCGCT CACCGCGAAG 
CCGCTCATCG GCGTGCTCCC CGACGGGCTC GCGTTGCCCG ATCAGTTCAC CGGGCCCGAA 
CTCCTCACCT ACCTCGGCCG CCTGCGCGGG ATGCCAGAAT CCGTGATCGC GCAGCGCCGC 
GACGAACTGC TCTCCGTACT CGGTCTCGCC GATGCCGGCG GCACCGTGAT CGCGGACTAC 
TCGGCGGGCA TGACGAAGAA GATCGGGTTG GCCGCCGCCC TGCTGCACGG CCCCCGGCTG 
CTGGTGCTCG ACGAGCCCTT CGAGGCCGTC GATCCCGTCT CCAGCACGTC GATCCGCGCC 
ATTCTCGTGG ACTTCGTGCA CAGCGGCGGC ACGGTGATCC TCTCCAGCCA CGTCATGGCC 
ACCGTCTCCG AGCTGTGCAC ACACGTGGGC GTGATCAACG CGGGCCGGGT GGTGGCCGCG 
GGCACGGTCG ATCAGGTGCG CGCCGGCGGC ACTCTCGACG AGGCTTTCGT GCGACTCGTC 
GGTGGCGCCG CGCACACCGG CGGACTGTCC TGGATGCAGT CGTGA 

 

Protein sequence

MTTPAPPALL LQDLYLAFGN KEAVSGVSLW VPQGSMFGLV GPNGAGKTTS LSMAVGLLRP 
GRGRSLVFGV DVWGDPLTAK PLIGVLPDGL ALPDQFTGPE LLTYLGRLRG MPESVIAQRR 
DELLSVLGLA DAGGTVIADY SAGMTKKIGL AAALLHGPRL LVLDEPFEAV DPVSSTSIRA 
ILVDFVHSGG TVILSSHVMA TVSELCTHVG VINAGRVVAA GTVDQVRAGG TLDEAFVRLV 
GGAAHTGGLS WMQS