Gene Tpau_3053 details

Gene Information

• Locus tag: Tpau_3053
• ID: 9157224
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 3163007
• End bp: 3164953
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 71%
• Product: glucose-methanol-choline oxidoreductase
• Protein accession: YP_003647985
• Protein GI: 296140742

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.181626
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCTCAG ACACGTTCAC GCCCCGTCAG GCCCAGGCGC TCCTCGCGAT CGCGGAGACC 
CTCGTCCCGG GAGGCGACGG TGCGCCCGCT CCCCGCGATC TCGACTACAT GGCGACAGTG 
ACGCGTACCG CCGAGCACAA ACTGCTGCCG GGTGAGCTCC GGGAGATGAA GATCTTCCTC 
GATCTGTGGG ACACCCCAGG GATGGGGATG GTGCACGGGA TCGGCCCGCG GCGATTCTCC 
GCCGTCTCAC CGGCCGAACG CGAGGCGGCC CTGCTGCGCT GGGGCTCGTC GTCGGTCGGA 
GCGAAGCGAT CGATCTTCCA GGGGCTGCGT TCGCTGCTCA TCGGTGCCTA CTACATCGCG 
CCGGATGCCA CCGCGGTGCG CGCCGCCATC GGGTATCCGG AGGCCTTCGG TCCGCTCCCC 
GATGCGCCGC CGCGGCCGAT CACGCCGTTG GTCGTGCCGC CGGGCGGCGC CGCGCTCACG 
GCCGATGTGG TGATCGTGGG GTCGGGCGCC GGTGGCGGTA CCGCGGCCGC CGTGCTCACT 
GCCGCGGGGC TGGACGTGGT GGTGCTGGAG AAGGGCGGCT ACCACGATGA CCGGGACTTC 
GGCGCGGGCG AACTGGAGGC GCTCACGTCC CTGTACGCGG GCCCACCCGC CGCGACGAAA 
GAAGGACAGC TCTCGCTCAT GGCGGGCGGC ACCCTGGGTG GCGGAACCGT GGTCAACTGG 
ACAACGTCGT TCCCCACCCC GGATCACGTG CGGGCCGAAT GGGCCGGGCT CGGCGCCACC 
CAGTTCGCCG GCGAGGAGTA CGACCGCGCG CTGGCGGCTG TGCAGCAGCG ACTGTCGGTG 
AATACCGATC ACGACCGGAT CGCGCACCGC GACGCCGTGA TGGAACGCGG GCTGCGGGCG 
CTGGGTTGGC ACTGCGATGC CATGCCGCGC AACGTGGTCG GCTGCGATCA GGGAGTGGAA 
TGCGGACGAT GCGGCTACGG CTGCCGGATC GGCGCCAAAC AGTCGACTGC GAAGACCTGG 
CTGCAGGACG CCGCCGACGG TGGAGCACGC ATCGTGGTGG GGGCCGACGT GCGGCGAGTG 
CGGGTCGAGC GGGGCCGGGC GACCGGCGTC GAGGCGGTCA TGTCCGACGG TGCGCCGCTC 
ATCGTCGCGG CGAAGGCGGT CGTGGTCGCG GCGGGGACGC TCCAGACGCC GGCACTCCTG 
CGCCGGTCGG GACTGCGTAA CAAGCAGATC GGCGCGAATC TGCGGCTGCA TCCGGCGACC 
GCGGTCGCGG GCCGATTCGA CGAGGACATC CGGCCCTGGG AGGGCGGCCT GCAGACGCGA 
TACTCGACCG AGCACGCCGA TCTCGACGGC CGCGGGTACG GCGTGATCTA CGAGACCGGT 
CCGATGCATC CCGGCGCGGC TGCGATCTTC CAGCCCTGGC ACTCGGCGGA ACAGCTGGCG 
GAGGAGATGC GTGCGCTGCG CAATCTCGGT GTGGTGGGGG TGATCACGCG CGATACCGGG 
AGCGGTCGGG TCGCCGTGGG GCGGAACGGT GAACCCGTGG CGCATTACCG GATCAACGAT 
CACGATGCGG CGCACATGCA CCGCGGCATC GTCGGGGCCG CCCAGATCCT TGCCGCGGCT 
GGAGCGAGCT CGGTGCGGTC GGCGCACCAG GTCCGGGTGG CGGCCACGCT GCCCGGTCCG 
CTCGACGGAT TCGCCGCCGC CGCACAGGAA CAGGGGTATG CGCCAGGTCG CTGTTTGATG 
GCCGCTCTTC ACATCATGGG CACCGCGGCG ATGGGCGGGA GCCCGAAGAC ATCGGCCACG 
GATCCCGACG GCGCCACCTG GGAGGTGCCG AACCTGGTGG TCGCCGATGC GTCGTGCTTC 
CCCACACCCA GCGGGGTCAA TCCGATGATC TCCGTGGAGG CGATCGCGTA CATGAACGCC 
TGCCGCCTTG CCGCGCGGAT GACCTGA 

 

Protein sequence

MTSDTFTPRQ AQALLAIAET LVPGGDGAPA PRDLDYMATV TRTAEHKLLP GELREMKIFL 
DLWDTPGMGM VHGIGPRRFS AVSPAEREAA LLRWGSSSVG AKRSIFQGLR SLLIGAYYIA 
PDATAVRAAI GYPEAFGPLP DAPPRPITPL VVPPGGAALT ADVVIVGSGA GGGTAAAVLT 
AAGLDVVVLE KGGYHDDRDF GAGELEALTS LYAGPPAATK EGQLSLMAGG TLGGGTVVNW 
TTSFPTPDHV RAEWAGLGAT QFAGEEYDRA LAAVQQRLSV NTDHDRIAHR DAVMERGLRA 
LGWHCDAMPR NVVGCDQGVE CGRCGYGCRI GAKQSTAKTW LQDAADGGAR IVVGADVRRV 
RVERGRATGV EAVMSDGAPL IVAAKAVVVA AGTLQTPALL RRSGLRNKQI GANLRLHPAT 
AVAGRFDEDI RPWEGGLQTR YSTEHADLDG RGYGVIYETG PMHPGAAAIF QPWHSAEQLA 
EEMRALRNLG VVGVITRDTG SGRVAVGRNG EPVAHYRIND HDAAHMHRGI VGAAQILAAA 
GASSVRSAHQ VRVAATLPGP LDGFAAAAQE QGYAPGRCLM AALHIMGTAA MGGSPKTSAT 
DPDGATWEVP NLVVADASCF PTPSGVNPMI SVEAIAYMNA CRLAARMT