| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3040 |
|---|
| Symbol | |
|---|
| ID | 9157211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3150783 |
|---|
| End bp | 3152120 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003647972 |
|---|
| Protein GI | 296140729 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATT TGCCCTTCGG TTTCTCCCAG CGGGATGACG ACGGCGACGG CCGTGACAAG
CCGTTCGGCG CGAATCAGCC CTTCGATATG AGTCAGCTCG GCGACATGCT CAGCCAGCTC
GGCCAGATGA TCTCCGGTAT GGGGTCGGGA ATGACGGCGC CCGGCGCCGC CGGCGGTGAC
CCGGTGAACT ACACCGTGGC CTCGCAATTG GCCCGGCAGA CGCTCGGCAG GCACGAGCCC
GTCACCGACG GTCAGCGCCA CGCGGTCGAC GAGTCCATGC ACCTGGCACA GCTATGGCTG
GACGAGGCCA CGGTACTGCC GGCCGGTCCG CAGAAGACGG CGGCATGGAC CCCCGTGGAC
TGGCAGGAGA AGACGCTGCC CACGTGGAAG CGGCTGGTGA ATCCGGTGGC CGAGAAGGTC
TCCGGGGCGT GGCTCGGCGG TCTCCCGGAG GAGGCGCGCG AGATGGCGGC CCCGATGATG
GGCATGTTCA GCCAGCTCGG GTCGATGTCC TTCGGCACTC AGCTCGGCCA GGCCCTGGGC
ACACTGTCGA AGGAGGTGCT CACCAGCACC GATATCGGCT TACCGCTCGG GCCCGACGAC
ACCGCGGCCC TCCTTCCCGC GGCCATCGAG GAGTTCGGTA AGGACCTGGA GCAGAAGGAC
CAGGAGATCC TGGTCTTCCT CGCCGCCCGT GAGGCCGCCT ACCAGCGGCT GTACTCGCAC
GTGCCCTGGT TGCGCGCCCG CGTCCTGGAT GCGGTGGAGC AGTACGCGCG CGGTATCCAG
TTCGACATGT CGGGGATCGA GGAAATCTCG CGCAACCTGG ATCCGTCGGC GCTGTCGGAT
CCGGCGCAGC TGGAGCAGCT CATGGCGCAG CAGAACGCCG CGATGCAGCC GAAGGCCACA
CCGGAGCAGA AGGCGGCGCT GGAGCGGCTC GAAACCCTCC TCGCGTTGAT CGAGGGCTGG
GTCGAGACGG TGGTCAACGA CGCCCTCGGG GAGCGCCTGC CCAGTGCGGC CGCGCTGCGC
GAGACGATGC GCCGCCGTCG CGCCTCGGGC GGTCCCGCGG AGCAGACCTT CGCCACACTC
GTGGGCCTGG AGCTGCGCCC GCGCAAGGTG CGCGAGGCTG CCGCGCTGTG GGAGAAGCTG
CTCGCGGCCA CCTCCATGGA GCAGCGGGAC GGCGTCTGGG AGCACCCCGA CCTGATTCCG
GATTCCTCCG ATCTCGATGC GCCCGCCGGC TTCATCGATC GGATGCTGGG CGATGCCTCC
GACCTCGACG ATCCCATCGC CGCTCTGGAG CGTCAGATGC AGCGCGACGC GGACGAGGAC
AAGGGCAGCC CGGAATAA
|
|---|
| Protein sequence | MNDLPFGFSQ RDDDGDGRDK PFGANQPFDM SQLGDMLSQL GQMISGMGSG MTAPGAAGGD
PVNYTVASQL ARQTLGRHEP VTDGQRHAVD ESMHLAQLWL DEATVLPAGP QKTAAWTPVD
WQEKTLPTWK RLVNPVAEKV SGAWLGGLPE EAREMAAPMM GMFSQLGSMS FGTQLGQALG
TLSKEVLTST DIGLPLGPDD TAALLPAAIE EFGKDLEQKD QEILVFLAAR EAAYQRLYSH
VPWLRARVLD AVEQYARGIQ FDMSGIEEIS RNLDPSALSD PAQLEQLMAQ QNAAMQPKAT
PEQKAALERL ETLLALIEGW VETVVNDALG ERLPSAAALR ETMRRRRASG GPAEQTFATL
VGLELRPRKV REAAALWEKL LAATSMEQRD GVWEHPDLIP DSSDLDAPAG FIDRMLGDAS
DLDDPIAALE RQMQRDADED KGSPE
|
|---|
| |