Gene Tpau_3013 details

Gene Information

• Locus tag: Tpau_3013
• ID: 9157182
• Is gene spliced: No
• Is pseudo gene: Yes
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 3123363
• End bp: 3129124
• Gene Length: 5762 bp
• GC content: 66%

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCCTA GAATCTATCT CCTCGCCTTC GGTACCTTCA CCGTCGGCAC CGAGGGCTAT 
GTGATTGCCG GAATCCTGCC TGAAGTCGCC GCCGACGTTC ATGCCTCGGT GGCGCTGTGT 
GGTCAGCTCG TGACCGTGTT CGCCCTGGTG TACGCACTCG CGGGGCCGCC GCTGATCGCG 
CTCTTCCATC GTGTTCCGCC GAAGACGCTG CTTGTAGGAG CGGCGATCGG CTTCGCCTTG 
TCGAACGTTC TCGCGGCAGT CGCGAGCAAT TTCGCCGTGC TCACCGTCGC CCGCGTGGCG 
GCTGCGGTGA CCGCGGCGCT CTTCGCCGCT CCGGCGGCCA GCGCGGCCGC CGCCCTGAGC 
AAACCGGAGG ACCTGCCGCG AGCCATCGCG GTCACCGCGA GCGGGAACGC TCTGGCGCTC 
ACCGTCGGCG CCCCGATCGG AACGGTGATC GGCGCGCTCG TTGGCTGGCG TGGCGCCTTC 
TTGTTCGTTG CTGGATTGGC CGTGGTGTCG GCAGTCGGGG TGTTCCTCTG GTTGCCGACG 
GTGCCGGTCC CGGCAGCTTC GACCGGGCGG CTCAATCTCC TGCGGAGTGC CCCGATCAGG 
TGGGGTCTCG TCACTACGTT CGGACTGTTC TTGGCCGCGT ATTGCACGTA CACATACCTC 
GCGCCCATTG TGGGTGGTTG TGACAGCTTG GGTAGGCCCC GGTTCGACGG CTTGACTTGG 
ACCCGTTTGC GACTCGCCGG TGGTGTTGCG GCGGTTTGAT CTGGCCCCAT CTGATGGTTG 
CTCGTGAACA TCGTTTCCGA GCTGAAGCAG GTGGTGGTCG ATGATGGGAT CGAAGGTGGA 
GCTGTTCGCG CAGATTCGGC GGGATGCCCG GGTCGAGGGC ATGAGTATCC GGGCGTTAGC 
CCGGAAACAT GGTGTGCATC GTCGGACGGT GCGGCAGGCG TTGTCGTCGG CGGAGCCGCC 
GCCGCGGAAG ACGCCGGAGC GGTCATCGCC GCGGTTGGAT CCGTTCAAGG CGGCGATCGA 
TGCGATGCTG CGGTCGGATC TTCAGGCTCC TCGGAAGCAG CGGCATACGG CGACGCGGAT 
CCGGGAACGT TTGGCGATCG AGCACGGCGC GGTCGAGTTG TCGTATTCGA CGGTGCGGGA 
CTACGTGCGG GTTCGGCGGG CGCAGATCGA GGTGGAGGCC GGACGGCGCA CGGAGGTGTT 
CATCGCTCAG GATCACGCGC CGGGTGCGGA GGCGGAGGTC GACTTCGGCG AGGTTTGGGT 
GATCCTGAAC GGGGTCAAGA CCAAGTGCCA CATGTTCGTC TACCGGCTCT CGCATTCGGG 
CAAGGCCATT CACCGGGTCT ATCCGATCGG CGGGCAGGAA GCGTTCCTCG AAGGACACGT 
GGAGGCGTTC CGCGAGCTCG GTGGGGTCCC GACCCGGCAC ATCCGCTACG ACAACCTGAC 
CTCGGCGGTG GTCGCGGTGC TGCAGGGCGG GGACCGGCGC CGGCAGGAGA ACCCGCGCTG 
GACGTTGTTT CACTCGCACT ACGGGTTCGA TCCGTTCTAC TGCCAGCCTG GTATCGCCGG 
GGCGCATGAG AAGGGTGGCG TTGAGGGCGA GGTCGGTTGG TTTCGCCGCA ACCGTTTGAC 
CCCGATGCCG CAGGTGGAGT CCCTTGATGA GCTCAACGAG CAGATCAAAA CTTGGGAAGC 
GCGCGATGAG GGCCGGCGTA TCGACGGCCG ACTGCGGACC GTCGGCCAGG ACTACCAGCA 
CGACCGGGCT GCGCTGGCTC CGTTGCCGGT GGAGGATTTC GACCCTGGTC TGGTCCTCAC 
ACCGCGGGTG GACCGCTCGG CGATGATCAC CGTTCGGATG GTCCGCTACT CGGTGCCGGC 
GCATCTGATC GGCCGCCGAG TCCGCGTCTC CCTGCAGGCC TCTCAGCTGC TGGTCTACGA 
CGGCCGCGCC CTAGTCGCGC GGCACCAGCG CGTCGCCGGC CGCGGTATCG CGAAGGTCGA 
CCTCGACCAC TACCTCGAGG TTCTCAAGTT CAAACCCGGC GCCCTGCCGG GATCAACAGC 
GTTGGCTCAA GCCCGCGCAG CGGGGGTGTT CACCGCCAGC CACGACGCGT TCTGGGCCGC 
AGCCCGAAGA GTGAACGGTG ACGTCGACGG CACCAGCGAG CTGATCGACG TGCTGCTCTT 
GCACCGCAGC CTGCCCGCGG ACGCGGTGAC TGCCGGCATC GACGCTGCAT TGCGGGTCGG 
GGCGGTGACC GTCGAGGTGG TCGCGGTGGA GGCCCGCCGC GCAGACGCAG CACTGCTGAC 
CACTAGCGAC ATGACGGGTG GGGCCAGCTC GGGTCGTCAT CGCGTTCGCC ACGCTGATCG 
GCGTGAGCAA CGAGTTGTCA GCCTCACCCA ACGACGCCTC GCAGACCCGG CCGCGGTGAT 
CGCCGGCCTC CCACCTGACC GACGGCCACT ACCGACGGTC GCCGCCTACG ACCGGCTCCT 
CCGTCGGCGC ACCGCCTCAG ACGCTCCACC ACCACCGACT CCGGAAAGGC ACCCATGAGC 
ACCACCACCT CGAAGTCCCA GGCCACCACG CTGGCGCCAT CACTGCGGCG CCGCGGAGGT 
CTCACCGAAG AAGCCGCGAT CGCTGCCGTT GACCAAGCCT GCCGACGCCT GCGGCTACCG 
ACGGTGCGGT CGATGATCGA CCAGCACCTC GCCGCCGCGG CCAAGCAACA GCTCTCGTAT 
CAGGGGTTCC TCGCCGAACT CCTCCTGGCG GAGGTCGATG ACCGCGACCG GCGCTCGACT 
GTTCGCCGCG TGAAAGCCGC CGGGTTCCCG AGGGATAAGT GGTTGGCGGA CTTCGACTTC 
GACGCCAACC CCGACATCGA GGCCGCCACC ATCCACCAGC TCGCCACCGG CGACTGGATC 
CGCCACGGCC TGCCGCTCTG CCTGATCGGC GACTCCGGAA CCGGCAAATC CCACCTGCTG 
ATCGGATTGG GAACCGCCGC CGCTGAGCAG GGCTTTAGAG TCCGCTACAC CCTCGCCACG 
AAACTGGTGA ACGAGCTGGT CGAAGCCGCT GACGACAAGC AGCTCGCCAA GACCATCAAC 
CGCTACGGCC GCGTTGACCT GCTCATCATT GACGAGCTCG GCTACATGGA ACTCGACCGC 
CGCGGCGCCG AACTGCTCTT CCAAGTCCTC ACCGAACGCG AGGAGAAGAA CAGCGTCGCG 
ATCGCCTCCA ACCAATCCTT CTCCGGCTGG ACCGACACCT TCACCGACCC CCGGCTCTGC 
GCCGCCATCG TCGACCGGTT GACCTACCGC GGCACCATCA TCGAAACCGG CACCCACAGC 
TACCGACTCG CACACACCGA GGGGGCGGCA GAGTTCTGAC AGACGGGCAT GACTCGCTGA 
CTTCAACGGC ACTCGATACG GTGGCGGGTA TGGCGATAAC GCGAGGCACC GAGCGGTTCG 
CGCTGCTGGC GGAGCAGACG CAAGCCGCTG CCCGGCGACG GGGGATTGCG GTCACCGACG 
AGGTGATCGA TCAGATCCTC AACGCCGAAA TTGAGCGGGT GGCCAAGTTG ATGGGAATCG 
AACCTCGCAC AGCCCTGCTA TACACGCCTG CGGATCTGCC GCTGACGTTG GCAGAGATGA 
TCGCAGCCAC CCACCACCAG TAACCGGGTG CCAGCACTGA CCAGCGGTGT TATCGCTGGT 
TGAGCACTGC GCGGGCGGTA GCAGCGATAC CGTCGTCTGT TCCGCGCACG TGCCATCTAT 
CGCGGTGCGT ATCGGTCATG CTCTCGAGGA TCGTGTAGGT CGGGCTCGTC ACGGGCAGCA 
TCATCGGGTA GCGGTTGGCG CCGCCGGTTC TCCATCCTGC TGCGTAGAGC AGGTCACTGA 
CCTCTTTTCG CCAGTTCTCC ACCGGTGTTC CGCTCCCGAC CACGGCAAGC AGGAGCCATC 
CGGCCTCACG ATCGAAATCC TTGGTACCGC AAGGAAGCCG TCCCACGATG TGTTCCCACA 
ACGCTGTGGG GTCACCGCCG ATGCGACGAG CAGCCCGGGT TGGGCTGATC CTGCCCTTGC 
GGACACTGAG TAGCCCCACC GCCTGCGCCG CTTCACGCAC CGTCGCCACC GGAGGCGTGA 
GATCCTCCCG GTTCGCCTTT CCCATCCACC AGTTCGCGAT GCCACTGCGC TGCGCGAACC 
GCTCGACCAC AACAGGCGGG AGGTAACCCG CGGCGGTGAG CTTGACCCCC TCACCGACTT 
CTTCGAGCAG CAGACGGTAA GGCTCGGTGA GCCGTTCAGC TTCCGCGGCG GACACACTGG 
CCTGGCCGTG CGACTGCGGC CGCGCGAGCA CCCCCTGCAA CAACGAGCTG CCCTGCATCG 
TCAGCCGATG GGCGATCTGC CCCAGTTCAC CGTGGCCTGG AGCCAGAACC GAAGCAGGAT 
CGAAAAGAGC GAGCGTGATG GCGGCATTGG CGTCATCGAC GTCGAAGACA TCCGGGTCCC 
AGCCCCCAGG GAGCCAGTCG TTCGCCTCCT CCGCGCTGCC GAAACTGTCA GGAAGGTGCG 
CCGCGTCCCT ACCCTTGCGA ACCCACAGTG CTACTTCATG GAACCCGCCC AGACCACCGC 
AGTCCTCAGG CGGGCACGCG TTCTTCCCCG CCACACACAG CGACGCAGAC GGACAGGTGT 
CGAGGACCTG CTCAACCTTG AGCTTGTGCT CCCAGCCATC GCCAAAGTCG TACTCGTACC 
ACAGCTCGTC ACCCACGCCC GCGATGACCT GATCGAGCCG GACATCCTGC TCCAGCACCC 
CTTCCTCGCC CTCGCTGACA TCGAATGCCG TCAGGAAGGC CGGAGAACGA TGATCGCTGC 
CTGTCCTGAA CTTGTGCAGG TGACAGTCGT ACCAGCCCAT CGCCGCCTGG ATCACCTCGT 
GCACAGCAGA AAGTGTCAGA TCGCCGGGCA ACTCCAGCCG CCGCCACACA GGAGGCTTCG 
CGCCATGCAG ATCCAACCGG ACACGAAACC CGACCACCCG GTCAGGCACA GGTAGCAGCG 
TCGGCTGCCG CACCCGCGTC AGAGCATCGA CCTCTGCAGC GAACCGCGCG TTCACCACCG 
CATCAAGCAC AACCCGTCTC TCCTGCGGGC TCAGCCCCTC CACATACTCG CGGGCCACAG 
CAGACAGATC CTCGACCATG CCCCCCAGTC AACCAGGACT CGACACAACC CGCCCCACCG 
CGAACCAGAC TACGCCCGGG GCCAAATCAA ACCGTCCCAG TGGGGCCACT CCCAGTTGAC 
ATAGCCATGT GGGGGCCGCC GCAGGAATGG GAAGCCACGG CGTCGCGGCC CTCATGATCG 
TGTTCGGTGC TGGCGGGTTC CTGGCGGGAC GCACCATCGG GCGGGTCCTG CAGTCGGTTC 
CGATCAAGCG GGTTCTGATC GTCGTGTTGT CGACGATGAC CGTTCTGCTC GGGATTCTGG 
CGTGGCTCAC GGCGATCGAG GTTCACCCGC TCGCCGCGAT CGTTCTCTTC CCGCTGCTGT 
TCGCGTTGGG CGGTGCGTGG TGGTCGGGTG GGATCTCGCA GCAGACGCGT ATCGCCGGAC 
ATGCGCCGGC ACAGCGCTCC CAGGCGATCG GCCTGCACTT CTCCGCGCAG TTCTTGGGCG 
TTGCCGTGGG CGGTGCGCTC GGAGGCCTGG CGCTGGACAA CTCCGGTCCT GTGGCCGTCC 
CGGTGGTCAG CGCGCTGATC GCAGCGGCCA CGATCCTTTC GGTGCGAATG GTGGCGCCCG 
TCGCCGGTAG CGGGGCTCCG GGGGCCGCAG ACGCCCGGCA TACCGCCTTC GCGCCGTCGT 
AG 

 

Protein sequence