Gene Tpau_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3007 
Symbol 
ID9157176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3117613 
End bp3118866 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content70% 
IMG OID 
ProductD-amino acid deaminase 
Protein accessionYP_003647941 
Protein GI296140698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.675457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGGG GGATCGGGGC GCGACCAGAC ACTCTGAGCA TGGTCGACAA GGCTGTCCCG 
GCGTGGGCCG ACGGTCTCGA CCGGGCGGAG TTCCTGGCGC GTGGACCGCG CTTGAGTGAT
CTCTCGACCC CGGTTCTGGT GCTCGATCGC GCGGCGATGG ATCGCAACGT GGCCGAATTC
GCCCGGTGGA CGGCTGCCCA CGATCTCGAC CTCGAGCCGC ACGGTAAGAC CACGATGGCG
CCCGCGCTGT GGCAGGACCA GCTCGACGCC GGTTGCACCG CCATCACCGT CGCCAATCTG
CCACAGCTCC AGGTCGCGGT CGCCGCCGGA TTCCGGGATC TGCACGTGGC CAACGCCATC
GCCGATCCCG CCGGACTGCG CTGGCTGGGT GCCGCACTCG ATGCGGACCC GGAGTTGGCC
GTGACGCTGT GGGCCGACGG TCCGAGCACC GTCGACGCCC TGGAGCGCGG ACTCGCGGGT
GCCGTCCGAC AGCCCACGGT GCTCGTCGAA CTCGGTGGCC CCGGCGGCCG CACCGGGGCT
CGCTCGATCG ACGACGCCTA CGCGACCGGC GAGCGGGTCG CCGCGTCCGA CCGGCTGCGC
CTGGGCGGCG TCACCGGCTA CGAGGGCGCC TTCGCGCACG ACACCTCCGC CGCATCTCTC
GCCGCTGTCG ATGAATACCT GAACAACATT CTCGCCCTGC ACGAACGACT CCGCCCCCTG
TACCCGGAGG GTCGGATCGT GCTCTCCGCG GGCGGAAGCG CCTACTTCGA TCGCGTCGCC
GCCGTGCTCG GCGGAGTCGA GGGCGCGCGC GTGGTCGTCC GATCCGGGGC GTACATCATC
CACGACGACG GCTTCTACCG GTTCATCACG CCGTCGGGAC GCGAGGCCGG CGCACCGGAA
CTGCGCTCCG CCATGCACAT CTGGGCCCGC GTCATATCCC GGCCGGAACC CGGGCTCGCG
CTCCTGGACG TTGGTCGACG CGACGTCTCG TTCGACGAGG GACTGCCCGA GCCGCAGGCC
GCGGCGGGCA ACCTGGGGGA GGAGCCGCGC CCCCTGAGCG CCGAGATCTC CGCCGTCAAC
GACCAGCACG CGTTCCTCCG CCTTCGCGCG GACGACCCGC TCCAGGTTGG CGACGTCGTC
CGGCTGGGTC TCAGTCATCC GTGCACCGTC TTCGACAAAT GGAGGGTGAT CCCGGTCGTC
GCCGACGACG CGACCGATCC GATCGTGGTC GATGTCATCT CCACCTACTT CTGA
 
Protein sequence
MSRGIGARPD TLSMVDKAVP AWADGLDRAE FLARGPRLSD LSTPVLVLDR AAMDRNVAEF 
ARWTAAHDLD LEPHGKTTMA PALWQDQLDA GCTAITVANL PQLQVAVAAG FRDLHVANAI
ADPAGLRWLG AALDADPELA VTLWADGPST VDALERGLAG AVRQPTVLVE LGGPGGRTGA
RSIDDAYATG ERVAASDRLR LGGVTGYEGA FAHDTSAASL AAVDEYLNNI LALHERLRPL
YPEGRIVLSA GGSAYFDRVA AVLGGVEGAR VVVRSGAYII HDDGFYRFIT PSGREAGAPE
LRSAMHIWAR VISRPEPGLA LLDVGRRDVS FDEGLPEPQA AAGNLGEEPR PLSAEISAVN
DQHAFLRLRA DDPLQVGDVV RLGLSHPCTV FDKWRVIPVV ADDATDPIVV DVISTYF