Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3007 |
Symbol | |
ID | 9157176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3117613 |
End bp | 3118866 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | D-amino acid deaminase |
Protein accession | YP_003647941 |
Protein GI | 296140698 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.675457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGGG GGATCGGGGC GCGACCAGAC ACTCTGAGCA TGGTCGACAA GGCTGTCCCG GCGTGGGCCG ACGGTCTCGA CCGGGCGGAG TTCCTGGCGC GTGGACCGCG CTTGAGTGAT CTCTCGACCC CGGTTCTGGT GCTCGATCGC GCGGCGATGG ATCGCAACGT GGCCGAATTC GCCCGGTGGA CGGCTGCCCA CGATCTCGAC CTCGAGCCGC ACGGTAAGAC CACGATGGCG CCCGCGCTGT GGCAGGACCA GCTCGACGCC GGTTGCACCG CCATCACCGT CGCCAATCTG CCACAGCTCC AGGTCGCGGT CGCCGCCGGA TTCCGGGATC TGCACGTGGC CAACGCCATC GCCGATCCCG CCGGACTGCG CTGGCTGGGT GCCGCACTCG ATGCGGACCC GGAGTTGGCC GTGACGCTGT GGGCCGACGG TCCGAGCACC GTCGACGCCC TGGAGCGCGG ACTCGCGGGT GCCGTCCGAC AGCCCACGGT GCTCGTCGAA CTCGGTGGCC CCGGCGGCCG CACCGGGGCT CGCTCGATCG ACGACGCCTA CGCGACCGGC GAGCGGGTCG CCGCGTCCGA CCGGCTGCGC CTGGGCGGCG TCACCGGCTA CGAGGGCGCC TTCGCGCACG ACACCTCCGC CGCATCTCTC GCCGCTGTCG ATGAATACCT GAACAACATT CTCGCCCTGC ACGAACGACT CCGCCCCCTG TACCCGGAGG GTCGGATCGT GCTCTCCGCG GGCGGAAGCG CCTACTTCGA TCGCGTCGCC GCCGTGCTCG GCGGAGTCGA GGGCGCGCGC GTGGTCGTCC GATCCGGGGC GTACATCATC CACGACGACG GCTTCTACCG GTTCATCACG CCGTCGGGAC GCGAGGCCGG CGCACCGGAA CTGCGCTCCG CCATGCACAT CTGGGCCCGC GTCATATCCC GGCCGGAACC CGGGCTCGCG CTCCTGGACG TTGGTCGACG CGACGTCTCG TTCGACGAGG GACTGCCCGA GCCGCAGGCC GCGGCGGGCA ACCTGGGGGA GGAGCCGCGC CCCCTGAGCG CCGAGATCTC CGCCGTCAAC GACCAGCACG CGTTCCTCCG CCTTCGCGCG GACGACCCGC TCCAGGTTGG CGACGTCGTC CGGCTGGGTC TCAGTCATCC GTGCACCGTC TTCGACAAAT GGAGGGTGAT CCCGGTCGTC GCCGACGACG CGACCGATCC GATCGTGGTC GATGTCATCT CCACCTACTT CTGA
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Protein sequence | MSRGIGARPD TLSMVDKAVP AWADGLDRAE FLARGPRLSD LSTPVLVLDR AAMDRNVAEF ARWTAAHDLD LEPHGKTTMA PALWQDQLDA GCTAITVANL PQLQVAVAAG FRDLHVANAI ADPAGLRWLG AALDADPELA VTLWADGPST VDALERGLAG AVRQPTVLVE LGGPGGRTGA RSIDDAYATG ERVAASDRLR LGGVTGYEGA FAHDTSAASL AAVDEYLNNI LALHERLRPL YPEGRIVLSA GGSAYFDRVA AVLGGVEGAR VVVRSGAYII HDDGFYRFIT PSGREAGAPE LRSAMHIWAR VISRPEPGLA LLDVGRRDVS FDEGLPEPQA AAGNLGEEPR PLSAEISAVN DQHAFLRLRA DDPLQVGDVV RLGLSHPCTV FDKWRVIPVV ADDATDPIVV DVISTYF
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