Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2965 |
Symbol | |
ID | 9157133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 3072851 |
End bp | 3074773 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | xanthine permease |
Protein accession | YP_003647900 |
Protein GI | 296140657 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.276589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGCAT CCCTCTCGCC CACGCGTGCC GCCACGACGC ACCCCGTTGA CCGGGTGCCG TCCGCCGGTC GGCTTGTCGC GTACGGCGCA CAGCACGTCG TCGCCTTCTA CGCGGGGGCG GTGCTGGTCC CCATCATCAT CGCGCGGTCG ATCGGCTTGT CGGCCGACGA GCTGCGCCTA CTGATCATGG CGGACCTGTT CACCTGCGGT ATCGCCTCGA TCATCCAGTC TGTGGGCTTC TGGAAGGTAG GCGTGCGACT GCCCCTGTTG CAGGGTGTCA CCTTCGCGTG CGTGAGCCCG GTGGTGGCGA TCGCGCTCAG TAAGGGCGGC GGAACCGCGG GCCTTTTGTA CGCCTACGGC GCCGTCATCG TCGCAGGGAT CGTCACCTTC CTGATCGCGC CGTATTTCGC GCGCCTGCTG AAGTTCTTCA CTCCGGTGGT CACGGGCACG GTGCTCACGC TGATCGGCAT CTCACTGCTG CCGGTGGGTG CGCGCGATGC CGTCACGAAT CCACATACCG GACAAGAAGA CCCCGCGAAC GCCCGGTGGC TGCTGTATGC ACTCGGCACG ATCGCGGTGA TCGTGCTGAT CCAGCGCTTC TTCCGCGGCT TCATGAAGAC GGTCGCGGTC CTGATCGGCC TCGTGGGCGG CACCGCCGTC GCCTTCCTGC TCGGCGACGC CTCCTTCGAC GAGGTGGGTC GCGCCGACGC GATCGGCTTC GCGCATCCGT TCGTCTTCGG TATGCCCCGG TTCGACCCGA TCGCCATCAT CTCGATGATC GTCGTCATGC TCATCATCGC GGTCGAATCG ACCGGCAGTG TGTTCGCCAC CGGCGACATC GTGGGCAAAC GTATCGGCAA GGAGGAGATC GCCGCCACCG TCCGCGCCGA CGGGGTCGCC TCGATCATCG GTGGAGTCTT CAATTCCTTT CCCTACACCT GCTTCTCGGA GAATGTCGGG CTGGTGCGCC TGACCGGCGT GAAGAGCCGC TGGGTGGTGG CGGCGGCCGG TGGCATCATG ATCGTGCTGG GCCTGCTGCC CAAGGGGGCT GCCGCGGTGG CGGCGATTCC CGCGCCCGTG CTCGGCGGCG CGGCGCTCAC CCTGTTCGCC ACCGTTGCGG TGATCGGTAT CCAAGTGCTC TCACGGGTGG ACTTCTCCGA TCACCGCAAT CTGATCATCG TCGCCACGTC GCTGGGAATG GGACTGCTGG TGACCACCTA CCCGAAGATC TCCGAGGCGG TACCGCCGTG GCTGGAGATC CTGTTCGGAT CGGGGATCAC GCTCGGCAGC GTCACCGCGA TCGCCCTGAA CGTGTTGTTC TTCCACGTCG GCCGACGCGA GGGACCGGCG GTCGCAGGAG GCCCGGCGGT GGGGGTTATC ACGCTCCCGG AAGTCAACCG CATGTCGCGA CAGCGGTTCG GCGAGGTCTT CGGATCGGTG GTGCAGAACA ACGATTGGGT TCTGGACCGC GCGTTCGCCG AGGCGCCGTT CGCCGATACC GGAGCACTGC GCGCCGCCTT CGCGGAAGCG ATCCTCGGCG GATCCGATGC TGAGAAGACC GATCTCATCC GTTCCTTTCC CGATCTCGGC GCACGAAGCT CCGACGGCGA GGCCTTGGCG GCCGATCACG TCGCCCTCGC CGAGCTCGGT CCCGAAGAGC GGGCCGAAGT CGACGCACTG GCGGTGGCTT ACCGCGACCA GTTCGGCTTC CCGTTGGTGG TGTGCGCCCG GGAGATCGCG CACTACGACC GGGTCCTGCG ATCGGGGCGC GAACGCCTGG AGAACTCTGC GGCCACCGAA CGCGCCTTCG CGGTGGTCGA GGTCGCCAAG ATCGTCAACT ACCGGTTCGA CGACACCGTG GCGAACGCGA ACCCGATCGC CTCGGCGCTC GGGGCGGGTC CGGCGATCGA GCGTCGGTGG TGA
|
Protein sequence | MTASLSPTRA ATTHPVDRVP SAGRLVAYGA QHVVAFYAGA VLVPIIIARS IGLSADELRL LIMADLFTCG IASIIQSVGF WKVGVRLPLL QGVTFACVSP VVAIALSKGG GTAGLLYAYG AVIVAGIVTF LIAPYFARLL KFFTPVVTGT VLTLIGISLL PVGARDAVTN PHTGQEDPAN ARWLLYALGT IAVIVLIQRF FRGFMKTVAV LIGLVGGTAV AFLLGDASFD EVGRADAIGF AHPFVFGMPR FDPIAIISMI VVMLIIAVES TGSVFATGDI VGKRIGKEEI AATVRADGVA SIIGGVFNSF PYTCFSENVG LVRLTGVKSR WVVAAAGGIM IVLGLLPKGA AAVAAIPAPV LGGAALTLFA TVAVIGIQVL SRVDFSDHRN LIIVATSLGM GLLVTTYPKI SEAVPPWLEI LFGSGITLGS VTAIALNVLF FHVGRREGPA VAGGPAVGVI TLPEVNRMSR QRFGEVFGSV VQNNDWVLDR AFAEAPFADT GALRAAFAEA ILGGSDAEKT DLIRSFPDLG ARSSDGEALA ADHVALAELG PEERAEVDAL AVAYRDQFGF PLVVCAREIA HYDRVLRSGR ERLENSAATE RAFAVVEVAK IVNYRFDDTV ANANPIASAL GAGPAIERRW
|
| |