Gene Tpau_2958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2958 
Symbol 
ID9157126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3065220 
End bp3065780 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content66% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003647893 
Protein GI296140650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0440878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCGA GGGATGACTT GATTCGCACC ACCATCGATC TGATGCGTGA GCGTGGTGTA 
GCGGGTACCG GTATCGCCGA CATCCTTGAG GACAGCGGGC GATCGCGGCG CACGGTCTAT 
CTGAACTTCC CCGAGGGGAA GGCGGAGCTC GTGGAGGCGG CCACACGCGC TGCCGGCGGC 
TACATCACGG CGCTGATCGA AACGGCGGTC GCGAAGTCCA CCGGTCGTAC CGACATGCTC 
GAACACGTGG GATCGATGTG GCGCAAGGTG TTGGTGTCCT CGCGCTTTCG GTCGGGCTGT 
CCCATCGTCG CCGCGACATT GGGGCGCGCG GAGTCGGCGC CGGCCGCCGA TGCCGCCGGA 
GAAGCTTTCG AAACGTGGAT CTCTCTGCTC GCGAGCAGGT TCGAGGACGA TGGTGGTCAG 
CCGCTCGCGG CTCGTCAGGC GGCCACCACT ATCATCGCCG CCATCGAGGG CGCGGTGATC 
GTGAGTATCG CGACGCAATC CTCGCAGCCG CTCGACGATG TCGAGGCCTC GCTGCTCGCG 
ATGTACGGCG ACCGGCCTTA G
 
Protein sequence
MTSRDDLIRT TIDLMRERGV AGTGIADILE DSGRSRRTVY LNFPEGKAEL VEAATRAAGG 
YITALIETAV AKSTGRTDML EHVGSMWRKV LVSSRFRSGC PIVAATLGRA ESAPAADAAG 
EAFETWISLL ASRFEDDGGQ PLAARQAATT IIAAIEGAVI VSIATQSSQP LDDVEASLLA 
MYGDRP