| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2833 |
|---|
| Symbol | |
|---|
| ID | 9156998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 2933417 |
|---|
| End bp | 2935753 |
|---|
| Gene Length | 2337 bp |
|---|
| Protein Length | 778 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_003647770 |
|---|
| Protein GI | 296140527 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.837627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAG CCGCCGACCT CACCCTGCAG ACTCCGCTGG TCGAGGCCAT CGATCCCGAG
ATCGCCGACC AGGTCACCAC CGAGCTGGGC CTCGCCACCG TCGGTGACCT GCTGCGGCAC
TTCCCGTTCC GGTACGAGGG CGGTGCCTCG ATCGACGAGG GCACGCGCGC CACCGAACCG
AAGATCGGCG ATGACGTGGT GGTGATCGGC ACGGTGACCG CGGTGACGCC GCCACGCCCG
CACCATCGCG GGAAGAAGAT GTTCAAGGTG CAGGTGGTCA ACAAGGTCCG CGCCTACGAC
GTGACCTTCT TCAACTACCT GCCCAAGCCG ATCCAGCCCG GACGTCAACT GCTGCTGATC
GGGCGGTTGG GCGAGTTCAA CCGGAAGCTC CAACTCACGC ATCCGGACTG GCTGGTCCTG
CCGGACGACG ACATGTCCTC GACCGAGGCT CTCGCCGCCA ACGAGACCGG CGCCACCAAA
GCCGGTTCCA AGCGGCTCAA GCTCGCGAAC CTCGCCCTGC TCACCGGGCC GGTGGTGCCG
ATCTACCACG GCACCAAGAA CATGCCCACC TGGCTCATCG CTTCCATCGT CGACCTGGTC
CTGACCCGCT TGGCGCCGGT ACCGGAGTCC CTGCCGGACG GATTCCGCTC GCTTCACGGC
TTGCTCGGCT TCGACGAGGC GCTGCGTGTG GCGCACTTCC CGAAGCGGCG CTCCGAGGCC
GATGCTGCGC GGCGGCGGCT CTCGTTCGAC GAGGCCGTCG CGATCGAGAC GGCGCTCGCG
CGGCGTGCCC ATGACGTGGG CACGGTGCCG GCGCCGCAAC TCGCCGCCGT CGACGGTCCG
CTGCAGGCGG GGCTCCGGGA GCGACTTCCG TTCCAGCTCA CCGCCGGTCA GGAGGAGGTG
CTCGCGGAGA TTCTCGGGGA TCTGTCGCAG GGACACCCGA TGACGCGGCT GCTGCAGGGT
GAGGTGGGCT CCGGCAAGAC GTTGGTCGCG TTGTTGGCGA TGCTGGCCGC CGTCGATTCC
GGCTACCAGG CGGTCTTGCT CGCACCGACG GAGGTGCTCG CCACGCAGCA CATGCTCTCG
ATCACGAAGA TGCTCGGCGA CCTGGGCGAA GCGGGGCAGC TCGGCGCGGC CGACGCCGCG
ACCACCGTGA CCCTGCTCAC CGGGTCGATG AACACCAAGG CGCGGCGAGC GGCGTTGCTG
CGGATCGTCA GCGGTGAAGC GGGCATCGTG ATCGGCACGC ATGCGCTGCT CGAAGACACC
GTCGACTTCT TCCGGCTGGG TCTGGTGGTG GTCGATGAGC AGCACCGGTT CGGTGTGGAG
CAGCGGGACC GTTTGCGGCG CAAGGGACCC GACGATATGA CCCCGCACCT GCTGGTCATG
ACGGCCACGC CGATCCCGCG CACCGTGGCG CTCGCCCAGT TCGGTGACAT GTCCACCTCG
GTGCTGCGCG AGCTCCCGCG CGGGCGGCAG CCGATCCAGA CGTCGGTGGT CCCGGAGGGC
AGGCCCGGGT GGATCGATCG GGCCTGGGCC CGGGTCGACG AGGAGGTCCG CGCGGGCCGC
CAGGTGTACG TGGTGTGCCC GCGGATCGGT GATGACCCCT CGGGCGAGCA GGCGAAGACG
TCGTTCACCG ACGAGGACTA CCAATTCGAG CAGGTCGCTG CCCCGGTGCG CCGGGAGAAG
GACCGCGGTG ATGCCGGGGG CGAGGACGCC GCCGAGAGCG AGCAGCCGAA GATGACGTCG
GCGATCGACA TGTACGACCA GCTCGTCGGA AGTGAACTCG GACAGCACCG GATCGCCCTG
CTCCACGGCC GTCTGCCCGC CGAGGAGAAG GCCTCCGTCA TGGCCGAATT CGCGGCCGGC
GAGATCGATG TGCTGGTGGC GACCACGGTG ATCGAAGTGG GTGTCGACGT CGCCAATGCC
ACCACCATGG TGGTGATGGA CGCTGAGCGG TTCGGTATCA GCCAGTTGCA CCAACTGCGC
GGCCGTGTCG GACGTGGCGG CTTGCCGGGG CTGTGCCTAC TGGTGACCGA CACCCCGTCG
GCGCGCACCA TGGAGCGGCT GGAGTCGGTG GCGGGCACCG TCGACGGATT CGCCCTCGCA
CAGCTCGACC TCGAGCACCG CGGTTTCGGC GATATCCTCG GCGTGGACCA GTCCGGCCTC
GCGCGGCGCC TGAGTTTCCT CGACCTCGCG AACGACGGCG ACGTTCTCGA CGCCGCCCGG
GCATTCGCCT TCGAGGTGAT CGACGAGGAC CCCGAACTGG AAGGTCATGG AGCGCTGCGG
GAGATGAACG CGGTGATCCT CGGCGGTAGT CGTGAGGACT ATCTGGACAA GGCCTGA
|
|---|
| Protein sequence | MSAAADLTLQ TPLVEAIDPE IADQVTTELG LATVGDLLRH FPFRYEGGAS IDEGTRATEP
KIGDDVVVIG TVTAVTPPRP HHRGKKMFKV QVVNKVRAYD VTFFNYLPKP IQPGRQLLLI
GRLGEFNRKL QLTHPDWLVL PDDDMSSTEA LAANETGATK AGSKRLKLAN LALLTGPVVP
IYHGTKNMPT WLIASIVDLV LTRLAPVPES LPDGFRSLHG LLGFDEALRV AHFPKRRSEA
DAARRRLSFD EAVAIETALA RRAHDVGTVP APQLAAVDGP LQAGLRERLP FQLTAGQEEV
LAEILGDLSQ GHPMTRLLQG EVGSGKTLVA LLAMLAAVDS GYQAVLLAPT EVLATQHMLS
ITKMLGDLGE AGQLGAADAA TTVTLLTGSM NTKARRAALL RIVSGEAGIV IGTHALLEDT
VDFFRLGLVV VDEQHRFGVE QRDRLRRKGP DDMTPHLLVM TATPIPRTVA LAQFGDMSTS
VLRELPRGRQ PIQTSVVPEG RPGWIDRAWA RVDEEVRAGR QVYVVCPRIG DDPSGEQAKT
SFTDEDYQFE QVAAPVRREK DRGDAGGEDA AESEQPKMTS AIDMYDQLVG SELGQHRIAL
LHGRLPAEEK ASVMAEFAAG EIDVLVATTV IEVGVDVANA TTMVVMDAER FGISQLHQLR
GRVGRGGLPG LCLLVTDTPS ARTMERLESV AGTVDGFALA QLDLEHRGFG DILGVDQSGL
ARRLSFLDLA NDGDVLDAAR AFAFEVIDED PELEGHGALR EMNAVILGGS REDYLDKA
|
|---|
| |