| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2729 |
|---|
| Symbol | |
|---|
| ID | 9156892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 2833373 |
|---|
| End bp | 2834194 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_003647666 |
|---|
| Protein GI | 296140423 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTCG CGGAACTGGC GCAGTGGCCG GTGGAGAATG CAGCCGGAGC GCTGTTGCGC
ACGGACGATG CGCGCACCGT CGACGGCTAC GGCGATCTCG ACGCGGAGTA TGAACTCGCT
TCTGTCACCA AGCTTCTCGT GGCCTACGGG ATCCTCGTCG CGATCGAAGA GGAGGCGATC
CGGCTGGACC AGCCGGTGGG GCCGCCGGGG AGTACCGTCG AGCACCTGCT GGCCCACGCC
TCTGGGCTCG CGTTCGATTC CGACGAAGTG GTGGCCGCGC CGGCGACACA ACGGATCTAC
AGCTCCTACG GCTACGAGCT GGTGGCCCGT CTGGTGGAGG AGGAGACCGG TATCGGATTC
CCCGACTACC TCCGCGAGGC CGTCTTCGGC CCCCTCGGAA TGACTCGCAG CAGCCTGCCC
GGCCCCGCAG GCCACGGAGC CCGCTCGACG GTGGCCGACC TGACGCGCTT CGCTGCCGAG
GTGGCCGCCC CTACTTTGCT GGACCCGCGC ACCGTCGGGG GTGCGTGCAC GGTCCACTTC
CCAGGCCTCG CCGGCTTCGT CCCCGGATAC GGCAAATTCA TCCAGAACAC CTGGGGGCTC
GGCTTCGAGA TCAAGGGCGA CAAACGCCCG CACTGGACGG GAACCCGGAA CTCGCCGCGC
ACCGTCGGGC ACTTCGGGCA GGCGGGGACG TATCTGTGGA TCGACCCCGA TCTGCAGCTC
GCAGCGGTGA TCCTCACCGA CCGGCCGTTC GGTGCGTGGG CTAAACCCCT GTGGTCCGAG
TTCAACGACC GCCTGATTTC TCAGGAACTA CAAGGCGTGT AA
|
|---|
| Protein sequence | MSLAELAQWP VENAAGALLR TDDARTVDGY GDLDAEYELA SVTKLLVAYG ILVAIEEEAI
RLDQPVGPPG STVEHLLAHA SGLAFDSDEV VAAPATQRIY SSYGYELVAR LVEEETGIGF
PDYLREAVFG PLGMTRSSLP GPAGHGARST VADLTRFAAE VAAPTLLDPR TVGGACTVHF
PGLAGFVPGY GKFIQNTWGL GFEIKGDKRP HWTGTRNSPR TVGHFGQAGT YLWIDPDLQL
AAVILTDRPF GAWAKPLWSE FNDRLISQEL QGV
|
|---|
| |