Gene Tpau_2628 details

Gene Information

• Locus tag: Tpau_2628
• ID: 9156789
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 2729594
• End bp: 2730142
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 65%
• Product: lipoprotein signal peptidase
• Protein accession: YP_003647568
• Protein GI: 296140325

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.191199
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTCGA GCCCAACCGA GACCAGGAGC TGGTACCGCG ACCCGCGGAT CGTGCTCGCG 
GTGATCGCGG TCGCGGCGTG GCTGATCGAT ATCGCCGCCA AGACCTACGC CGTGCGCAAC 
ATGGAATACG GCGAGCGGAT CCAGGTGTTC GGCCCGTTCA GCCTGATCTT CATCAAGAAT 
CCCGGCGCCG CGTTCTCGAT GGCCACCGGC TACACCTGGG TGCTCACACT CGTCGCGGTG 
TGCGTGGTGG TGTGGATCGT GCGGATGGGG TCCAAGCTCA CGTCCATTCC GTGGGCTGTC 
GGCCTGGGGC TGGTGCTCGG CGGTGCGCTC GGTAATCTCA CCGACCGGAT TTTCCGGGCA 
CCGGGTGTGT TCCGGGGCCA TGTGATCGAC TTCTTCTCGG TGGGCGACTG GTTCCCGGTG 
TTCAATACGG CCGACTGCGC GATCACCACC GGCGCGGTGC TCCTGGTCGG GCTCACCCTG 
TTCGGTAAGG ACCCGTACGA GGGCTTCGGG CAGAAGAAGG TCACCAGTGA GGAGGCCGCC 
GATGCGTGA 

 

Protein sequence

MDSSPTETRS WYRDPRIVLA VIAVAAWLID IAAKTYAVRN MEYGERIQVF GPFSLIFIKN 
PGAAFSMATG YTWVLTLVAV CVVVWIVRMG SKLTSIPWAV GLGLVLGGAL GNLTDRIFRA 
PGVFRGHVID FFSVGDWFPV FNTADCAITT GAVLLVGLTL FGKDPYEGFG QKKVTSEEAA 
DA