Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2594 |
Symbol | |
ID | 9156755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 2691890 |
End bp | 2694652 |
Gene Length | 2763 bp |
Protein Length | 920 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003647536 |
Protein GI | 296140293 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGCTGG TAGGCAGAGA CGGCGAATGC GCGCGGATCG ACCGGCTACT TGCCGGCGCG CGCGCCGACC GCGGCGGCGC CCTCGTCGTC CGCGGCGAGC CCGGTATCGG CAAATCCGCC CTCCTCGAAC ACGCTGCCCA CGAGGCGCAA GCGTCGGGAA TGCGGGTCAT CCGCGGCGCA GGCATTGAGT CCGACGCCGA GCTGGCCCAC GGCGGCCTGC ACCAGTTGCT CTGGCCCCAC CTGGCGCGAC TCGACGCGTT GCCCGCGCCG CAGGCCGCCG CCCTGCGCAC GGCATTCGGG CTCGACGATG GCTTGGCGCC CAACCGTTTT CTCGTGTCAG CGGGAGCGCT CGCCCTGTTC GCGGACCTTT CCGACGATGC GCCGCTGCTG GTGATCGTCG ACGATCTCCA GTGGCTCGAT CGCGGTTCCA CCGAGGCTCT CCTGTTCGCC GCGCGACGCT TCGCCGCCGA TCCCATCGCG ATGCTGTTCG CGGTCCGCGA GACGTCGATG CCCTTCGTTA CTCCCGGCGT CGACACCATC GCGCTCGACG GGCTCCGCGC AGGTGATGCC GCCTGCATCC TCGATGCGCA CGCACCGGGG ATCGATGGAC CTCTGCGCGC TCGCGTCCTG GATGAATCGG CGGGAAATCC GCTCGCCCTC ATCGAACTCG GCTCACTGCG GAAGGCGGGT GACGAAAGCG CGCCGTCGGA CATCGCGGGT CCGGTGGGTG CGCTCCCCGT GTCGCAGCGC GTGCACCTGG CCTTTCGCGG CCAGATCTCA GCGCTCCCCG ACGCCACGCG CCGCGCCTTA CTCGCCGCGG CTGCGGACTC GGCCGCTCCG CTTGCGACCA CGCTGCGTGT CATCGAAGCG CTCGGTGGCG GGATCGCCGA TCTCGTGCCC GCCGAGCGGG CAGGCCTCAT CACCGTTGGA GAGCGGATCC TCTTTCGCCA TCCGCTGGTT CGGACGGCCG CCTACCGCGG CGAGCCGCTG CCGCACCGGA TCGACGTGCA CCGTGCCTAC GCTCATGCGG CTGCGGCTGA TGCGGACCGC CGGGCCTGGC ACCTCGCCGC TGCGACGACG GCACCGGCCG AATCCGTCGC CGCCGAACTC GACGGTGTTG CCGAACGCGC CCGCCACCGC GGCGGCGCCA TGGCCGTCTC GATCGCCTAC GACCGCGCGG CACGGCTCAG CGAGGACGGC GAGCGCAGGG GCGCACGGGT CGCGCTGGCG GCGCAGGCCG CCTACGACGG CGGACGGCCC GACCGTGCAC AGCGACTCGC CTCCGAGGCC CTGGCGCTGA GCGGCGACGC CGGGGTGCGC GCGGATGCGG TGTACGTGCT GGGCGCGGTC GCCTACGAAC GCCAGTCTCC GCGCGCCGAC GCCGAGCTCA CCCTCGAAGC GGCGCGGTCG ACGCTCGCGG ACGATCCGGA GCGGACCGTG CTCGCGTTGT ACGAAGCGGG ACACGCCGCC CGGCACGGGG CGGCGGGAGA TCTGCTGCAG GAGGTGGCCG CGGTGCTCCG CGACGTCACG CCACCCGAAG AGTGGACGCC CGTCGTCGAA GCTCTCCTCG GTTGGGCCGA ACTCGCCGAC GGCAGGCCAG GCCATGCCAT CACCCGCATG CTCCCACCCG TAGTGGGCTC CGGCAGTGTC CCACTGACCC ATGCCATCAC CGCCGCCATC AGCGGGCTGC TCACCGCGCG AGAGGATGAG GTCGTTCCCG CCGTCGAGGA GACGCTCGAC GCGGCGCGCG CAGAGGGCGC GCTGGGCTGG ATCCCGTACT TCCTCGGCGT GCTCGCGGTC GCCCGGCTGC TCCGCGGGGA GTTCGCAGAC GCTCGCGCCT GCGTCGCCGA GGGCGCGGCG GTGAGCGAGG AACTGGCGAA CCGCACGGAA TTGCTCGCGC ACCGTTCGCT CGAGGTGTGG TTGCTCGCGG TGTCGGGGGA GGAGCAGAGC TGCCGGGCTC TCGCCGAGCA CGTCCTCCCC GAGGCACGGC ACCGGCACCG CGTCGACGCC GACATCGGGA TGTGGGGGAC CGGCGTGCTG GACCTCGCGG CGGCCCGGTA CGCGGACGCA GTGGTCGCGC TGGAGGCCGT GTGCACAGGT CCGGCCCGGC GCGACGTCCT GCTGCGCGCC GTGCCCGACC TGGTGGAAGC AGCCGCGCGC GGCGGCGTGC CGGAGCGGGC GGCTGGTCCG CTGGCTGACT TCGCGGAGTG GGCCGAGGTC GTCGGCCGGC CCGTGACGAG CGGCCTCGCA CAGCGCTGCC GCGCCCTTCT CGCCGACGAC GACGAGGCCG AGGAGCTCTA CCTCGGAGCA CTGCGCCTGC ATGAGGAGGC CGCGGGTGGC TACGACCTGG CCCGCACCCG GCTGGTTCAC GGGGAGTGGC TGCGCCGCCG ACGGCGCCGG ACGGAGGCCC GGGCTCAGCT CGACGCCGCG CTCGCCGGGT TCGAGGACGT CGGCGCCGCC GCGTGGGCGC AGCGCGCTCG CAACGAGCTG GCAGCGCTGG GCGCCCCGGG GAAGGGAAAG CGCAGCGCAG GACCACTCAA CCTGCTCACG CCGCAGGAGT TGCAGGTGGT GCGGCTCGCG GCGGCCGGCA ACACCAACAA GGAGATCGCG GCGCACCTCT TCCTCAGCCC GCGCACGGTG GGCTACCACC TGTACAACGC CTACCCGAAG CTCGGCGTCG CGGGCCGCGG CGACCTCGCG GGCATCGTCG CGCAGGAACG TGGCACCGGT ACTCCGCTCC TGGAACCCGG TCATCGCGAC TGA
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Protein sequence | MTLVGRDGEC ARIDRLLAGA RADRGGALVV RGEPGIGKSA LLEHAAHEAQ ASGMRVIRGA GIESDAELAH GGLHQLLWPH LARLDALPAP QAAALRTAFG LDDGLAPNRF LVSAGALALF ADLSDDAPLL VIVDDLQWLD RGSTEALLFA ARRFAADPIA MLFAVRETSM PFVTPGVDTI ALDGLRAGDA ACILDAHAPG IDGPLRARVL DESAGNPLAL IELGSLRKAG DESAPSDIAG PVGALPVSQR VHLAFRGQIS ALPDATRRAL LAAAADSAAP LATTLRVIEA LGGGIADLVP AERAGLITVG ERILFRHPLV RTAAYRGEPL PHRIDVHRAY AHAAAADADR RAWHLAAATT APAESVAAEL DGVAERARHR GGAMAVSIAY DRAARLSEDG ERRGARVALA AQAAYDGGRP DRAQRLASEA LALSGDAGVR ADAVYVLGAV AYERQSPRAD AELTLEAARS TLADDPERTV LALYEAGHAA RHGAAGDLLQ EVAAVLRDVT PPEEWTPVVE ALLGWAELAD GRPGHAITRM LPPVVGSGSV PLTHAITAAI SGLLTAREDE VVPAVEETLD AARAEGALGW IPYFLGVLAV ARLLRGEFAD ARACVAEGAA VSEELANRTE LLAHRSLEVW LLAVSGEEQS CRALAEHVLP EARHRHRVDA DIGMWGTGVL DLAAARYADA VVALEAVCTG PARRDVLLRA VPDLVEAAAR GGVPERAAGP LADFAEWAEV VGRPVTSGLA QRCRALLADD DEAEELYLGA LRLHEEAAGG YDLARTRLVH GEWLRRRRRR TEARAQLDAA LAGFEDVGAA AWAQRARNEL AALGAPGKGK RSAGPLNLLT PQELQVVRLA AAGNTNKEIA AHLFLSPRTV GYHLYNAYPK LGVAGRGDLA GIVAQERGTG TPLLEPGHRD
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