Gene Tpau_2465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2465 
Symbol 
ID9156625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp2560782 
End bp2561390 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003647409 
Protein GI296140166 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGCA GGGGTTGGAA CGGGACGCCG CCCGCCGACG ACGGCGAGGC CGCGGCGCGC 
ATCGTCGCCG CTGCGGCGGA GCTGATCGGC ACGCGTGGCA CCACCTCGAT AGCCGAGGTC 
GCCGAAGCGC TCGGTGTGAT CCGGCAGACG GTGTACCGGT ACTTCCCGAC GGTCGATGCG 
TTGCTCCAGG CAGCGGCGGT GCAGGCCGTC GGCGGGTTCC TCGACCGCCT CGCAGCGCAC 
CTGGACGGCA TCACCGACCC CGCCGACGCC GTGGTCGAGG GCATCGTCTT CACGCTCGAC 
CAGGTACCTC GCACCCCGCA CCTACGGCTG ATGCTCTCCG GTGCACACTC GCACACGGAG 
GCCATCGCCT CCGATCAGGC CATGGCGTTC GGTATGACCA TGATCCGGCG CTTCGACGTC 
GACTGGCCGG CCCACGGCTA CGACGAGCCG GCACTGCGCG AACTCGTCGA GTTCCAACTA 
CGGATCATGC AGTCCTTCTT CATCTCTCCG AGCATTCCGT CGCGCAGCCC GTCCGACCTG 
CGGAACTATC TCACCCGCTG GATCGCGCCC GCCGTCACCG ACTCCGGCGG GCGCACTCGC 
CCCGAGTGA
 
Protein sequence
MARRGWNGTP PADDGEAAAR IVAAAAELIG TRGTTSIAEV AEALGVIRQT VYRYFPTVDA 
LLQAAAVQAV GGFLDRLAAH LDGITDPADA VVEGIVFTLD QVPRTPHLRL MLSGAHSHTE 
AIASDQAMAF GMTMIRRFDV DWPAHGYDEP ALRELVEFQL RIMQSFFISP SIPSRSPSDL 
RNYLTRWIAP AVTDSGGRTR PE