Gene Tpau_2463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2463 
Symbol 
ID9156623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp2559728 
End bp2560474 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003647407 
Protein GI296140164 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTGTACC CGGCGGCGTT ACCGACGTTC GAGCGCCGCG TCCCCTCGGC GGACGTATCC 
GAGCTCGTGC GGTGGTTCTG GATCTCGCAG TGGGACATCG CTCCCGGCCG CGTCTCCCGG 
CAGGAGCTGT TGCCCTTCCC GGCGCTCAAC CTGGTGGTCG AGCAGGCGGT GACGGGCCTT 
TCGGGGGCGG CGACGGCGAT CGGTCACCGT GATCTGACAG GGCGCGGGTT CGCAGTGGGT 
GCACTGCTCA AACCCGCCGC GACGCCCGCT CTCACCGCTG ATCCGCAGGC GATCCTCGAT 
ACCTACTCCC CCATGGATCT GCCTGACCTG AGCGAACCGG TCGCGTCCGC GATGGCACGC 
GGGGATGTCG GAGCCGCGTG CGCGGCCTAC GAGTCGTGGC TGCGTGCGGG CCCTCGCCCC 
TCGGCGGAGG GGCTGCTCGC CAATCGGCTC GCGGCACTCA TCGAGGACGA CGAGACACTG 
CGCACCGTCG ACGATGTGGC CGCGGCGACC GGCACGTCGG CGCGAACGGT ACAGCGGTTG 
ACCCGCAAGT ACATCGGCCT GACACCGCTG GCGTTGATCC ACCGGAGACG ATTACAGCAT 
GCGGCGGAGC TGCTGCGCAC CGAGCCCGAT CTTCCGATGG CGCGGATCGC CGCCGACCTG 
GGGTACGCGG ATCAAGCGCA CCTGATCCGC GACTTCCGCA AGGTGCTCGG GTTCACGCCG 
GGAGGATACC GCCGCGACCT GCGGTGA
 
Protein sequence
MLYPAALPTF ERRVPSADVS ELVRWFWISQ WDIAPGRVSR QELLPFPALN LVVEQAVTGL 
SGAATAIGHR DLTGRGFAVG ALLKPAATPA LTADPQAILD TYSPMDLPDL SEPVASAMAR 
GDVGAACAAY ESWLRAGPRP SAEGLLANRL AALIEDDETL RTVDDVAAAT GTSARTVQRL 
TRKYIGLTPL ALIHRRRLQH AAELLRTEPD LPMARIAADL GYADQAHLIR DFRKVLGFTP 
GGYRRDLR