Gene Tpau_2358 details

Gene Information

• Locus tag: Tpau_2358
• ID: 9156514
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2451081
• End bp: 2451776
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 67%
• Product: NAD-dependent epimerase/dehydratase
• Protein accession: YP_003647303
• Protein GI: 296140060

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.503864
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTACCA ACGGCATCCG CAGGGTCTGC GTGGTCGGCG CCTCCGGCAA ACTCGGCCGT 
TACCTGGTCG AGCACGCGCT CGACCGCGGG TATCAGGTGA CAGGTGTGTG CCGGGAGCGA 
AGCGTCGACA AACTCGCCGA TATCGCCGAC CGAATCACGA TCATTCCGGG CGACACCGAC 
GATCGCACCG CGATCGCTGC GGCCGTCTCC GGTTGCGATG CAGTGCTCAC CGTTCTGGCC 
CCCTGGGGTG TGCGCGGATA TTCCTCCGGA ACCGCGAGGG CGGTGCTGGA TCTCGCGGAA 
TCCGATGCCA GACTGATCTT TTCTTGCGGA TGGCACGTCG CCCGCGACAA GCGCGATCGG 
TACCCGCGGA CAACCCGACT CGCCCAGGCC GCCGTCACCC GTGTGCTGCG CGCCATCCGG 
GTGATGGACA TCGATGATCA GGTCGCGGCA GCGCACGCGA TCTTCGCCAG CAACCGCCGC 
TGGACCCTCG CGCGAGGCAG CACTCTCGAG GAGGGGCCGA GCGAGGGATT ACCCGTGTGG 
GCCGAGAGCG TCGGCGATCC ACTCTTAGCG ATGAATCGCA CCCGCCGGAT CGACTACGCG 
CTGTTCATGA TCGAGGCACT CGACGATGAC GCCCTCATCG GCCGGGCCCC GGCGATCGTG 
AGCCGCCGCG CGCTGACTGC CGCGGTGGTC CCGTGA 

 

Protein sequence

MVTNGIRRVC VVGASGKLGR YLVEHALDRG YQVTGVCRER SVDKLADIAD RITIIPGDTD 
DRTAIAAAVS GCDAVLTVLA PWGVRGYSSG TARAVLDLAE SDARLIFSCG WHVARDKRDR 
YPRTTRLAQA AVTRVLRAIR VMDIDDQVAA AHAIFASNRR WTLARGSTLE EGPSEGLPVW 
AESVGDPLLA MNRTRRIDYA LFMIEALDDD ALIGRAPAIV SRRALTAAVV P