Gene Tpau_2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2354 
Symbol 
ID9156510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp2448523 
End bp2449077 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003647299 
Protein GI296140056 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.371839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCACCCG ACGCGACGGA GACGAAGCGG CGGATTCTCG CCGCCGCTCG GCAGGAGTTC 
GCCGAGTTCG GCCTGGCCGG GGCGCGGATC GATCGGATCG CCGATCAGGC GCAGGCCAAT 
AAGCGTTCGA TCTACATGCA TTTCGGGCCC AAGGAGCACC TCTTCGACCT GGTGGTGAGC 
TCAGCGCTCG CCGCGATGGC AGAGGCGGTG CCCTTCGACT CCGGGGATCT CGCCGACTAT 
GCCGTGCGAT TGTTCGACTA CGTGCATGAG CATCCGGACA CGCTGCGACT GACCACCTGG 
GCCAATCTGG AGCGTCCCGG CGCCACAGCC GCCGAGATCG CGACCTACCG AGCGAAGACA 
GACGCCTTGG ATTCCCGATA CGCTGATCGC TCCGCCGACG TGCTCACCCT GGTGCTCGGG 
CTCGTGACCG CCTGGGCGTC CGCGTCGCCC GCCCTCGTCG GCTTGCAGGC CCACCGAAGC 
CCGTCCGTCG ATGCGCGACG CGCGATGCTC TCCGATGCGG TCGGCGCCGT GGTGCGCGCC 
TTCGGTGAGG AGTGA
 
Protein sequence
MPPDATETKR RILAAARQEF AEFGLAGARI DRIADQAQAN KRSIYMHFGP KEHLFDLVVS 
SALAAMAEAV PFDSGDLADY AVRLFDYVHE HPDTLRLTTW ANLERPGATA AEIATYRAKT 
DALDSRYADR SADVLTLVLG LVTAWASASP ALVGLQAHRS PSVDARRAML SDAVGAVVRA 
FGEE