Gene Tpau_2309 details

Gene Information

• Locus tag: Tpau_2309
• ID: 9156465
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2402280
• End bp: 2402849
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 69%
• Product: protein of unknown function DUF1470
• Protein accession: YP_003647255
• Protein GI: 296140012

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAATTCG CACATGACAC GGAGCCCTCG CTGGTCATGG CCGCCGACCT CGCCAACTCC 
GACTACGACG GGCACGACCG TCTCGGAACC GTCGCCGCGA TCCGGGAGTA CCTGCGCGCG 
CACGAGTTCA CCGGATGGAG CGGCGCGGGC TCCGCCGATG TCGAACCGAT CCACGCCCTG 
CGCGCCGATC TGGTCCGCGT CTGGGCGGCA CACGACCCCG CCGACGTGGC GCACATCGTC 
AACGAGATGC TCGCGCAGTC CCCACAGCAG CCGCGGCTCA CCAAACACGG GAGCTGGGAC 
TGGCACCTGC ACTTCACCCC GGACGATGCG CCGATCCCGG TGCGCATGCG CGCGGAGTTC 
GCGATGGCCC TGGTCGACCT GGTGCGCAGC GGCAACGTCG ACCGACTCAA GGTCTGCGCC 
GCGGACGACT GTGATCGAGT CCTCGTCGAC CTGTCCCGCA ATCGCTCGCG CCGGTTCTGC 
AGCGAGGGGA ACTGCGGCAA TCGCACACAC GTCGCCGCGT ACCGCGAACG TCAGGCGTCG 
AGTTCTGGCG GGCGCCGCGA CGAGCCGTGA 

 

Protein sequence

MQFAHDTEPS LVMAADLANS DYDGHDRLGT VAAIREYLRA HEFTGWSGAG SADVEPIHAL 
RADLVRVWAA HDPADVAHIV NEMLAQSPQQ PRLTKHGSWD WHLHFTPDDA PIPVRMRAEF 
AMALVDLVRS GNVDRLKVCA ADDCDRVLVD LSRNRSRRFC SEGNCGNRTH VAAYRERQAS 
SSGGRRDEP