| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2293 |
|---|
| Symbol | |
|---|
| ID | 9156449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 2382882 |
|---|
| End bp | 2384504 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF222 |
|---|
| Protein accession | YP_003647239 |
|---|
| Protein GI | 296139996 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAGA ACAGCAGCGG CGCAAGTGAA TATCTTGACG TACTGACCTC CTTCGAGCGG
GCCGCCGAAC GTCTCGCCGC TGTCGATCCG GTGATGCTCA CTTCGCGAGA AGTACTCGAG
AGCCTGCACC GCCTCGAAAC CGCAGCGCGA AAGGTCCCGT ACGCCCAAAA CTCTCTTGCC
CGGATCGCAT TCGAACAGGA CCTGCCGGGG CAACTGAACT ACACCGGGCT CAAAGAAGTG
CTCGTTGATC AGCTGCGTCT CGCAGGTTCG GAGGCCCGCG ACCGCATGCA CGGCGCGGTC
GAGCGGGCGC CGCGCCACGA ACGCGGCGTC GCCCCCGAAC CAAAGCGCGC GCTGATCGCA
GCCGCCCAAC GCGCGGGGCG GATCTCCGAA CGGCACGCCA CCGCGATCCA GCGGATCGTG
AACAGCTGCC GCAGGCGCCT CACCACCACC GATGTCGAAC ACCTTGAAGA CATCTTGGTC
ACCGCCGCCA CCGACGTCAC TCCCGACGAC CTCACCAAGA TCGGCAAGCG TGCCGTCGAT
CTCCTCGACC CCGATGGCGC CGAGCCCAAA GAGGACATCA TCGCCCGCGC CCGCGGCGTC
GAGATCGGAA GCCAGGACGA CGATCTCATG ACCGACTTCG GCGGCTCGCT CAGCCCGGAG
GGCCGCGCCG TCATGAGCGC GATCTTGGAG AAGCTCGCCC GGCCCGGAGT AAACAACCCG
GACGACGCCG ACGCGCCGAT CACCCCGGCC GATCGGGCCG CGATCGACCA AGCAGCCCAG
CGGGACAAGC GCACGCAGGC CCAGCGTAAT CACGACGCCC TTATCACCGC TCTCCGCATT
GCGCTCGGCA CCGGGGAACT CGGGCAACAC CGCGGCCTGC CCTGCATTCC GATCATCACC
CTGACGATCG ACCAACTGGA GTCCGAGACC GGCATTGCCA CCACCGCCAC CGGCGGCCGG
CTCCCCGTTC CCGACGCGCT CCGCATGATG GGCACCAACC CCAAGTACGC GCTCCTTCTC
GACCTGGCGT CCCGCCCACT GTTCCTCGGC CGAGAGAAGC GCCTCGCCAC CCGGGACCAA
CGCATCGCGC TCTACGGATC CGAGAAGGGC TGCACCGCAC CCGGCTGTGA CCAGCCCGCG
ACGCGCACCC AGGTCCACCA CGTCACCGAC TGGGCCGACG GCGGAGGCAC CGACATCACC
GCACTGACCC TGGCCTGCGA TAAGCACCAC GCGGCAGTGA CCCCGGCGAG CGGCGATCGC
TCGCACGGCC TCGAGACCAT CACCATTGCG GATGGGCCGA ACGCCGGCCG CACCGGCTGG
CGCCGCACAG CCGACCCCAC TCACCGGTAC CGCGTCAACC ACACCCACCA CACCGACGAA
CTCCATCGCC ACGCCCTCGA ACACTGGCGG CGCCGGGCGA AGCAGTTCCG CGCGCGCTGG
CTCGCCGAAG ACCTCCGCGT GCAGTACAAC GCCGTCATCG GCAGCACCTA TCGCGATATC
TCCGCGACCC TCGACGGACC GAACGGCCCG CCCCTGCTCG AACAACTCCT GGCAGAGCAC
GACGCCGACA ACGCCTGGCG CCCTGCTCCA CCCGGTGATG CCAGCCCGCC TCGCGCGGCT
TGA
|
|---|
| Protein sequence | MSENSSGASE YLDVLTSFER AAERLAAVDP VMLTSREVLE SLHRLETAAR KVPYAQNSLA
RIAFEQDLPG QLNYTGLKEV LVDQLRLAGS EARDRMHGAV ERAPRHERGV APEPKRALIA
AAQRAGRISE RHATAIQRIV NSCRRRLTTT DVEHLEDILV TAATDVTPDD LTKIGKRAVD
LLDPDGAEPK EDIIARARGV EIGSQDDDLM TDFGGSLSPE GRAVMSAILE KLARPGVNNP
DDADAPITPA DRAAIDQAAQ RDKRTQAQRN HDALITALRI ALGTGELGQH RGLPCIPIIT
LTIDQLESET GIATTATGGR LPVPDALRMM GTNPKYALLL DLASRPLFLG REKRLATRDQ
RIALYGSEKG CTAPGCDQPA TRTQVHHVTD WADGGGTDIT ALTLACDKHH AAVTPASGDR
SHGLETITIA DGPNAGRTGW RRTADPTHRY RVNHTHHTDE LHRHALEHWR RRAKQFRARW
LAEDLRVQYN AVIGSTYRDI SATLDGPNGP PLLEQLLAEH DADNAWRPAP PGDASPPRAA
|
|---|
| |