Gene Tpau_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2172 
Symbol 
ID9156328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp2266906 
End bp2267589 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003647121 
Protein GI296139878 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.542757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACC CGCAGGACCC GAACCAGTGG GCACAGCAGG GCTGGCAGCA ACCGGGTCAG 
CCCGGCCAGC CCCCGCAGGG CTCCGATCAG ACGCAGATCA CTCCACAGTT CGGCGGCCAG 
CCGCCCGCCG GGCAGCCCTA CGCCGCGCCG GGTGCAGACC AGACCCAGAT CGCCCCCCAG 
TTCGGTGGAC AGTGGCCGGG GGCACAGGGC CAGCCCGGCC AGTATCCGCA GGGCCAGCCC 
GGTCAGCCGC AGCCCGGTCA GCACTCCGGT CAGTTCGGAT ACCCGGGCCA GCCCGGTCAG 
CCCTACGGCC AGTTCGTCCC GCAGTACGCG GGCGCACCCG GGATGCCGGG CGCACCGAAG 
AAGTCGAAGA ACGGACTGAT CATCGGGATC GGCGCCGCGG TCGTCATCGC GATCGTGGTG 
ATCGTGGTCC TCGTCGGCTA TTTCACCGAC GCCTTCTTCG GCAAGAAGTT CGACAACGGC 
GCGGTGAACG AGGGGGTCAC CAAGGTGCTG AAGGAGAACT ACAACGAGTC CGACACCAAG 
GACGTCAAGT GCAACACCGA CGGCGTGAAG GTGAAGGAGG GGAGCACTTT CACCTGCGAT 
GCCACGATCA GCGGTAAGCA GCGCACCGTG GACGTCAAGG TTCTCGACAG CGACGGCAAG 
TACCAGGTGG GCGCACCGAA CTGA
 
Protein sequence
MSNPQDPNQW AQQGWQQPGQ PGQPPQGSDQ TQITPQFGGQ PPAGQPYAAP GADQTQIAPQ 
FGGQWPGAQG QPGQYPQGQP GQPQPGQHSG QFGYPGQPGQ PYGQFVPQYA GAPGMPGAPK 
KSKNGLIIGI GAAVVIAIVV IVVLVGYFTD AFFGKKFDNG AVNEGVTKVL KENYNESDTK 
DVKCNTDGVK VKEGSTFTCD ATISGKQRTV DVKVLDSDGK YQVGAPN