Gene Tpau_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2164 
Symbol 
ID9156320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp2258007 
End bp2258726 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content71% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003647113 
Protein GI296139870 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.551521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCAA CTACGGCGAC CCCCGTCCTG TTCGTCCTCG GTGTCGGTCC CGGCCTCGGT 
ATGTCCGTGG CCCGTGCCTT CGCGCATCGG GGTTACCGGA TCGCCCTGGG GTCGCGCTCG 
ACGGACCGCC ACCGCGGTTA CCTGGGCGAG TTACGCGAGC TCGGCGTCGA TGCGGCCGCA 
TTCGAGGTGG ATGTCCTCCG CAGCGGATCG ATCGCAGCGG CAGTGAGCGC CGTGCGTGAG 
CGGTTCGGTC GCATCGACGT GGCGTACTAC GGTGCTGCGG CGCCCGTGGC GATGGGCCCG 
ATCGCGGAAC TGGACCCACA GGGCGCTGCC GAGGCGATGG GCACAGTGAC GCCGGCTGTA 
GAGTTCGCCC AGGCGGTGCT CCCCGAGCTG CGGGCGCACT CCGGCGGACT CGTCTTCGTC 
GGAGGGCTCA GTGCCGTGCT GCCGATGCCC GACGCCGGCG GTTTGTCCCT GGTCGCGGCC 
GCGTACCGCT CGTACGCGCG CAACCTGCAC GCCGCCCTGG CCTCCGAGGG GGTCTACGTG 
GGCATTCTGA CGGTGGGAGG CATGATCGCG GGCGGCGACA TCGCCAACGC GATGGCGGCG 
AGCACCCCCG CTGAGGAGCT CGCTCCGATC ACCCTGCAGC CGGACGATCT GGCCGAGACG 
GTGTGGCGCC TGGTCGCCGA CCGGGCGCAC CACGAGGCCG TGGTCGACGC GATGAGCTGA
 
Protein sequence
MTSTTATPVL FVLGVGPGLG MSVARAFAHR GYRIALGSRS TDRHRGYLGE LRELGVDAAA 
FEVDVLRSGS IAAAVSAVRE RFGRIDVAYY GAAAPVAMGP IAELDPQGAA EAMGTVTPAV 
EFAQAVLPEL RAHSGGLVFV GGLSAVLPMP DAGGLSLVAA AYRSYARNLH AALASEGVYV 
GILTVGGMIA GGDIANAMAA STPAEELAPI TLQPDDLAET VWRLVADRAH HEAVVDAMS