Gene Tpau_2145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2145 
Symbol 
ID9156301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2239248 
End bp2240957 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content68% 
IMG OID 
Product5'-Nucleotidase domain protein 
Protein accessionYP_003647095 
Protein GI296139852 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCATC ATCGGCTGAT CACCGCGCTG GCCCTGACCG CTTCGGCCGC CGTGCTAGCG 
AGTTGCGGCA CCGCCGGCGA CGGGGCGGCA CCGTCGACCA GTCCCGCATC GTCGAGCGCC
CGGGCCGGCT TCACGGTGCC CGGCGTGGGA GACCTGCCCC CTGCGAACCC GGACCAGGTG
CACCTGTTCG CGTTCAACGA CTTCCACGGC AACCTGCAGC CACCCACCGG CTCGACCGGC
AAGATCGGCG GCACAGAGGC AGGAGGTGCC GTGTACTTCG CCACCGCGCT ACAGCGACTC
AAGCAGGCCT ATCCGAACAA CCTCACCGTG GCCGCGGGCG ACCTAGTGAG CGCCAGTCCC
CTGGTCTCCG CGTTGTTCCG AGATGAACCC ACGGTGAAGT TCCTCAACTC CGCCGGTGTG
CAGGCATCGT CGGTGGGCAA TCACGAATTC GACCACGGCA CCATCGAACT CGAACGCCTG
CAGAAGGGTG GCTGTGCCCC CGACGGATGT GAACCCGGCG AGCCCTTCAC CGGAGCCGCC
TACCAGTACC TGGCCGCCAA CGTCACCAAC GAGGCCGGTC AACTCCCTCC GGGCACCGTG
CCGTGGAAGA TGTTCGAGGT GTCCGGACGC AAGATCGCCG TGATCGGCAC GGTCACCCCT
GAGACCGCGA CGATCGTGGC CCCGGAGGGG GTGCGCGGCT ATACCTTCGG CGATGAGGCC
GAGGCGATCA ACCGATACGT GCCGGAGATG AAGGCGGCCG GTGCGCAGGC CATCGTCGCG
ACGATGCACG ACGGCGGCGC CCAGAAGGGC TCCGGCGAAG CCGATCCCAA TGCCTGCAAC
AACGTCTCCG CGCCCACGCC GGACCTGGCT GCCAAAGTCG ACCCCGCCGT CACCGCCCTG
GTCACCGGCC ACTCCCACCA GGCGTACGTG TGCACGATCG GCGGCCGCAC CGTGACCCAG
GCCGCCTCGT ACGGACGACT GATCACCGAC ATCACGCTCG ACTTCGGCGC AGACCGGGTG
ACCTCGAAGG CCGTGAACCG TCTCGTGGGG CGCGATCTCC CGCCGGACGC CGCGACGCAG
CGACTCGTGG AGTTCTACGA GCAGGAGGCC AAGCCGCGCG CCGACCGGGT GATCGGCACC
ATCCCCGCAG ACCTCAACCG GGCGCCCTTC CCCGGCGGAG ACTCGGCGCT CGGCGATGTG
ATCGCCGACG CCATGCTGTT CACCACCCGC GCCCCGAACC CGGCGGCGGG CGTGATCGCG
TTCATGAACC CCGGCGGCGT CCGTGCCGAC CTCAAGGCCG GCGATGTGAC CTACGGTGCC
GCGTACACCG TGCAGCCGTT CGGCAACCAG GTGGTCACCG TCTCGCTCAC CGGACAACAG
ATCATCGACC TGCTCGAACA GCAGTGGCAG AACCCCGACA AGACCACGAT CCTGGCACCA
TCGGGCATCA GCTACACCTA CGATCCGAAT GGCGCGTCGA ACCGGAAGGT GCTGCGCGAC
AGCGTGAAGG TGGGCGATCA GCCGCTCAAT CCGGTAGCGG TGTACCGCGT GACCACCAAC
AACTTCCTGG CCGCGGGCGG CGACGGATTC AGCGTGTTCA CCCGAAGCAC GGATCTCACG
GTGGGCGGAA TCGACCTCGA TGCTCTGGAG AAGTACTTGC AGGCCACGGA GAACCTGCGA
ACCCCCACCA GCCGGATCAC GAAGCAGTAA
 
Protein sequence
MRHHRLITAL ALTASAAVLA SCGTAGDGAA PSTSPASSSA RAGFTVPGVG DLPPANPDQV 
HLFAFNDFHG NLQPPTGSTG KIGGTEAGGA VYFATALQRL KQAYPNNLTV AAGDLVSASP
LVSALFRDEP TVKFLNSAGV QASSVGNHEF DHGTIELERL QKGGCAPDGC EPGEPFTGAA
YQYLAANVTN EAGQLPPGTV PWKMFEVSGR KIAVIGTVTP ETATIVAPEG VRGYTFGDEA
EAINRYVPEM KAAGAQAIVA TMHDGGAQKG SGEADPNACN NVSAPTPDLA AKVDPAVTAL
VTGHSHQAYV CTIGGRTVTQ AASYGRLITD ITLDFGADRV TSKAVNRLVG RDLPPDAATQ
RLVEFYEQEA KPRADRVIGT IPADLNRAPF PGGDSALGDV IADAMLFTTR APNPAAGVIA
FMNPGGVRAD LKAGDVTYGA AYTVQPFGNQ VVTVSLTGQQ IIDLLEQQWQ NPDKTTILAP
SGISYTYDPN GASNRKVLRD SVKVGDQPLN PVAVYRVTTN NFLAAGGDGF SVFTRSTDLT
VGGIDLDALE KYLQATENLR TPTSRITKQ