Gene Tpau_2102 details

Gene Information

• Locus tag: Tpau_2102
• ID: 9156257
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2190593
• End bp: 2191294
• Gene Length: 702 bp
• Protein Length: 233 aa
• Translation table: 11
• GC content: 72%
• Product: Haloacid dehalogenase domain protein hydrolase
• Protein accession: YP_003647053
• Protein GI: 296139810

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAACC CCGTCGATCT CGTTGCACTC GATATGGCCG GCACCACGAT CGACGATGGC 
GGCGCCGTCT ACGAGGCGCT GCGCGGGGCC GTCGAGGACG CGGGTGCCTC TGTGGCGCAA 
TCCGATCTGC AGGTCTGGAT GGGCACCGAC AAGGTGGAGG CCATCACCCA TCTTTTGCGC 
CTCGGCGGGA TCGAGCCAAC GGACACGCTC GTGGCCGCCG GCTTCCGGCG TTTCCGCGAG 
CGACTCGCCG AGGCCTACGC CGCGGCACCG CCGAGGGCGA TTGAGGGCGT GCCCGCGGCC 
CTCGCTGAGC TCCGGGCGCG CGGTATCGCC GTGGCGCTCA CCACCGGGTT CGACGACGCC 
GTCGCCTATC CTCTGCTCGC CGCGCTCGGC TGGAAGATCG GGACCGACCT GGAATCGACG 
GTCGACGCGG TGGTCACCAC CTCCGACGTC CCGGCCGGGC GGCCGGCGCC GTACCTGATC 
CACCGGGCGA TGGAGAAGAC CGGTGCGCGC GATGTGCGCC GCGTGCTCGC CGCGGGGGAC 
ACCGCGGTCG ACGTGCAGGC CGCGTCGAAC GCCGGCGCGA TCTCGGTGGG GGTGCTCACC 
GGGAAGGCCG ATCCGGAGGT CCTCGCGGCG GCGGGCGCCG ACCACGTCCT CGACGGAGTC 
ACCGATCTCC CGGCGCTCCT GGCCGCCCCT GCAAAGCCCT AG 

 

Protein sequence

MNNPVDLVAL DMAGTTIDDG GAVYEALRGA VEDAGASVAQ SDLQVWMGTD KVEAITHLLR 
LGGIEPTDTL VAAGFRRFRE RLAEAYAAAP PRAIEGVPAA LAELRARGIA VALTTGFDDA 
VAYPLLAALG WKIGTDLEST VDAVVTTSDV PAGRPAPYLI HRAMEKTGAR DVRRVLAAGD 
TAVDVQAASN AGAISVGVLT GKADPEVLAA AGADHVLDGV TDLPALLAAP AKP