| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2088 |
|---|
| Symbol | |
|---|
| ID | 9156243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 2177886 |
|---|
| End bp | 2178791 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003647039 |
|---|
| Protein GI | 296139796 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0357677 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA CGACTCTGCC GGAACGCACC CGCGAGAACG TCGCCGACCG CCTGCTCGGC
GGCTCCGTCA AACGCTCGTA CGCGCCCGTC GTCGATATCG ACTGGGATGC TCCGATCGAT
CCCGACAGGT ACTTCCTGCC GCCCCACATG TGCACCCTGT ACGGCACGCA GATCTGGGAG
CAGATGACCG AGCAGCAGCG GATCGAGCTG TCCAAGCAGG AGATCACGAA TCTGCTGTCG
ATGGGCATCT GGTTCGAGAA TCTGCTCAAC CGACTCCTGC TCCGCGAGTT GCTCTCCGCC
GACCCCACCT CGCGTGATTC GTTCTACTCG CTGACCGAGA TGGGCGACGA GTGTCGCCAC
ATGGTGATGT TCGGCAAGGT GATCGATCGG ATCGGCACCC GCCCGTTCCG GCTGCGTGGG
TGGCAGCTCG CCGTGGTGAA GTACGCGCTG GCGCCAGTGA TTCGCGGCCA GGCGGTGTGG
ATCGCGGCAC TCGTGGGCGA GGAGATCTTC GACGCCCAAC AGCGTCAGAT CAAGGACGAT
CCCGAACTGC AGCCGATCGT GGCCCGCCTC ATGCAGATCC ACGTCACCGA GGAGGCACGG
CACATCGGCT ACGCCCGCGA CGGCGCCCGC CGCGGTGTCG CCAGCCGCAG CCGAGCTCAA
ACTCTGCTCG TCGGGAACCT GCACGCACTC GCGGCCTTCG GTTTCCGCAT GCTTTTCGCG
AATCCGCGGA TGTACGCACG CGTCGGTCTT GATGCCAAGG CCGCTTACCG TGCCGCCATC
ACGAATCCGC ACCACCGCAA GGCCAAGCAG GAGGGCTTCC GCGACCTGGG CCGGTTCCTC
GAATCGGTCG GTCTGATGGG GCCGATCGCG CGGTGGTCGT GGAAGAAGGC AGGATTCCTC
GCGTGA
|
|---|
| Protein sequence | MTDTTLPERT RENVADRLLG GSVKRSYAPV VDIDWDAPID PDRYFLPPHM CTLYGTQIWE
QMTEQQRIEL SKQEITNLLS MGIWFENLLN RLLLRELLSA DPTSRDSFYS LTEMGDECRH
MVMFGKVIDR IGTRPFRLRG WQLAVVKYAL APVIRGQAVW IAALVGEEIF DAQQRQIKDD
PELQPIVARL MQIHVTEEAR HIGYARDGAR RGVASRSRAQ TLLVGNLHAL AAFGFRMLFA
NPRMYARVGL DAKAAYRAAI TNPHHRKAKQ EGFRDLGRFL ESVGLMGPIA RWSWKKAGFL
A
|
|---|
| |