| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2056 |
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| Symbol | |
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| ID | 9156211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 2140703 |
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| End bp | 2141884 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003647007 |
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| Protein GI | 296139764 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.019716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATTTC GTCGTGTGGC CGCATTGATT CTGCGGGTCC TGTTCGATCC GGTGGGCTGG
CGGAACGCGG GACGCGCCGA ATTCGCCTTC ATGACCCGAG CACTCACCAC GGTGGGGGGC
CTCGGCGTGC TCCGCGTCAC CATCGCCACA CTCAGCGTGA TGCTGCTCCC GATCGGCGCC
TTCTCGGTCT TCATGCCCTA TGGACCGAGC ACCACCGGTA TACGCATTCT GTACATGACC
GCAGCGACGC TCGGTGCGGT CATCGGCATG TTCTGGATCG TGCGGCCGTG GCCGACGGCC
GGTCAGGCGA TCGCCTTCCT GGCCGCATCC GACGTTCTTC TCGCGACGGG TGTCACGGCG
AACCGGATCC CGGAGGCTCG GCTGTCCGGC GCGACTCTGC TGGCCATGCT GGGGATGTAC
GCGGCGTTCC TACTGGGGTG GCGCGTCCTG CTGGTGCACT GCCTGGCCTG TCTCCTGCTC
ATCTCGGGTC AGACCGTGTA CGGGGTGGTG ATCGATGGGC GCGGTTTCTT CGATCTGGTC
GCCTACGCGG CGCCCGCCGC CATCATCGTG AGCGCTTTGC CGGTGATGAT TCAAGCGGTT
ATCGAGATCA GCAGGCTGGG CATCACCAAG GTTTCCCGCG AGTGGTACGT CGACAGCCTG
ACCGGGCTGC TGAACCGGCG CGGTATGGAG GCGTGGATCG CCAGGGCGGT CAGACATTTC
GCGACCCCTG ATTCGGTGTA CATCAGCGCG ATCATCGACC TCGACGAGTT CAAGGCCTAC
AACGACACCC ACGGCCACCT TGCCGGCGAT GCGCTACTCG CCTCGGTCGG GGCGAGACTG
GAGGAGAGCC TGCCCAAGAC CTTGGTCGGC CGCAACGGCG GCGACGAGTT CGCCGTGTTC
GGAGTCCGCG CGACACGCGC CGAGGCGCAG GACATCGTCG AGAGCCTCGG CCGGCTGATC
CGCCCCCGTG GAGGTGCCGC GGGCGACACG ATCGCGGCCA GTGTCGGCGT GGCGATCGGC
TCCGCCGAGT ATGCCGATCG CGTGCGCGAT CTGGTCGCCG TGGCCGATGC CGCGCTGTAC
GACGCGAAGC GCAGCGACGA GCGGTCGATG ACGGTTCGCG ACGTTGCGAT CTCACCGACT
TCGGGACACG GCAGCGACAC GTCGAGGACA CTGAGCACGT AG
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| Protein sequence | MGFRRVAALI LRVLFDPVGW RNAGRAEFAF MTRALTTVGG LGVLRVTIAT LSVMLLPIGA
FSVFMPYGPS TTGIRILYMT AATLGAVIGM FWIVRPWPTA GQAIAFLAAS DVLLATGVTA
NRIPEARLSG ATLLAMLGMY AAFLLGWRVL LVHCLACLLL ISGQTVYGVV IDGRGFFDLV
AYAAPAAIIV SALPVMIQAV IEISRLGITK VSREWYVDSL TGLLNRRGME AWIARAVRHF
ATPDSVYISA IIDLDEFKAY NDTHGHLAGD ALLASVGARL EESLPKTLVG RNGGDEFAVF
GVRATRAEAQ DIVESLGRLI RPRGGAAGDT IAASVGVAIG SAEYADRVRD LVAVADAALY
DAKRSDERSM TVRDVAISPT SGHGSDTSRT LST
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