| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2033 |
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| Symbol | |
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| ID | 9156188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 2119776 |
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| End bp | 2120648 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | transcriptional regulator, RpiR family |
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| Protein accession | YP_003646984 |
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| Protein GI | 296139741 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.418875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGCGA CACCCCCCAG CACCTACATG GAGCTCCGCA CCGTACTGCA GGCACAGATG
GACCGCTTCG CGCCTGGGCA GCAGCGAATC GCGACGGTAA TACTCACCGA TCCCGAGGGA
ACGGCGCTCC GGACGATAGC GGAGACCGCT CGCATCGCAG AGGTTCACCA ATCATCACTC
GTGCGATTCG CCACTGGTCT GGGGCTCTCC GGCTACCCGG CCCTGGTCAA ACTCTGCCGG
GAGCATCTCG CCGAACAGGC ACACCTCGTC AGCAGGTTCG ACCGCGCCGC CGCCGAGCAC
GAGGACTCGG AACTCTTCCT GGCGGCGGTC GACAACGATC AGCAGAATCT GTCGCGGACC
TACGCGCGAA TCGACTCGCA CCAGTGGAGC CGCACCGTGA CCGCCCTGGC GGAGGCACCG
AACGTGCACG TCATGGGACT ACGCAAATGC CTTGGTGTCG CTCAGATGTT CGCCTACCTG
CTGCATATGG TGCGTCCCGG CGTCCACCAG ATCGCACCTC CCATGGGAGG TCTCGTGGAC
CAATTACGAG ACCTGCACAC CGATGACGTC TTCGTCGGAA TATCCATCCG GCGATACACC
GCGGACACCG TCAATGCGAT GCGCTACGCC CGACGCACCG GACTGCACAC GATCGCCCTC
ACCGACGACG CCGCGTCGCC GCTGGCCGCC GTCGCGGACA CGACATTCCT CATCGACACC
CATGGCGTCA CGATCTTCCG GTCGATGTCG GCTTTCACCT CGCTCATCCA GTCGTTGTCC
ACGGCTGTCG CTCTCGCACG CGGGGCACGC ACCAGGAACG AATTGGCGCA GGACGAAGCC
CTGCTCGACG AATTCGAGGT CTATATCCCC TGA
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| Protein sequence | MAATPPSTYM ELRTVLQAQM DRFAPGQQRI ATVILTDPEG TALRTIAETA RIAEVHQSSL
VRFATGLGLS GYPALVKLCR EHLAEQAHLV SRFDRAAAEH EDSELFLAAV DNDQQNLSRT
YARIDSHQWS RTVTALAEAP NVHVMGLRKC LGVAQMFAYL LHMVRPGVHQ IAPPMGGLVD
QLRDLHTDDV FVGISIRRYT ADTVNAMRYA RRTGLHTIAL TDDAASPLAA VADTTFLIDT
HGVTIFRSMS AFTSLIQSLS TAVALARGAR TRNELAQDEA LLDEFEVYIP
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