Gene Tpau_1995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1995 
Symbol 
ID9156150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2083865 
End bp2084905 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content66% 
IMG OID 
Productputative F420-dependent oxidoreductase 
Protein accessionYP_003646946 
Protein GI296139703 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.335211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCG GCCTCGGCAT CAATTACGCA GGTGAGTTCA ACGAGGTGGC CGACGAGGTC 
CTCGACCTGG AGAAAGCCGG GCTCGACATC GTCTTCGTCC CCGAGGCCTA CTCCTTCGAC
GCGGTGAGCG CCCTGGGCTA TCTGGCGGCG AAGACCGACA AGATCAAGCT GGCTTCCGGC
ATTCTGCAGA TTTACACCCG CACGCCCACG CTCACCGCCA TGACGGCCGC CGGCCTGGAC
AACGTCTCGG ACGGCCGTTT CATCCTGGGC CTCGGCGCTT CCGGCCCGCA GGTGATCGAG
GGCTTCCATG GCGTGCCCTA CGACGCTCCG ATCGGCCGCA CCCGCGAGAT CATCGAGATC
TGCCGCAAGG TGTGGCGCCG CGAGCGCCTC GAACACCGCG GCAAGTACTA CCAGATGCCG
CTCACGGCGG AGGACGGCGG CACCGGCCTG GGCAAACCGC TCAAGTTGAT CAATCATCCG
GTGCGCGAGA ACATCCCGGT GCTGCTCGCC GCGCTCGGCC AGAAGAACGT GGCCCTCGCG
GCCGAGGTGG CCGAGGGTTG GCAGCCGATC TTCTTCCTGC CCGAGAAGGC GAAGGACGTA
TGGGGCGATG CAGTGGCCGC GGGCAAGGCC AAACGCGACC CCGCGCTCGG GGAGCTCGAC
GTGTACGCCG GACCTGCCCT CGCCATCGGC GACGACGTCG ATCACCTGCT GGGTTTCGTC
AAACCACACC TCGCCCTCTA CATCGGGGGT ATGGGCGCCA AGGGCAAGAA CTTCTATCAC
ACGCTGGCCA CCAGCTACGG CTACGGCGCC GAGGCGGACC GGATCCAAGA GCTGTACCTC
GCGGGCGAGA AGACGGCGGC GGCCGAAGCG GTGCCCGATG AATTGGCCCG CAACGTCTCC
CTCATCGGAC CGAAGGGCTT CGTGGCGGAG CGGATCAAGG CTTTCGAACA GGCCGGAGCC
ACCGTCCTCA ACGTGACGCC GATCGCCGCC ACCAAACAGG ATCGCATCAA GCAGGTCGAA
CTCCTGCGCG ACCTCGTCTG A
 
Protein sequence
MRIGLGINYA GEFNEVADEV LDLEKAGLDI VFVPEAYSFD AVSALGYLAA KTDKIKLASG 
ILQIYTRTPT LTAMTAAGLD NVSDGRFILG LGASGPQVIE GFHGVPYDAP IGRTREIIEI
CRKVWRRERL EHRGKYYQMP LTAEDGGTGL GKPLKLINHP VRENIPVLLA ALGQKNVALA
AEVAEGWQPI FFLPEKAKDV WGDAVAAGKA KRDPALGELD VYAGPALAIG DDVDHLLGFV
KPHLALYIGG MGAKGKNFYH TLATSYGYGA EADRIQELYL AGEKTAAAEA VPDELARNVS
LIGPKGFVAE RIKAFEQAGA TVLNVTPIAA TKQDRIKQVE LLRDLV