| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1978 |
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| Symbol | |
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| ID | 9156133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 2067956 |
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| End bp | 2068783 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | shikimate-5-dehydrogenase |
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| Protein accession | YP_003646929 |
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| Protein GI | 296139686 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.227889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCTCCG CTACGCCGCG CCGCGCCGCG GTGGTCGGGA AGCCGGTCGA CCACTCGCTC
TCTCCGGTCC TGCATAACGC CGCGTTCCGG GCATTGGGCC TCGACTGGAG CTACCAGCGG
ATCGAGTGCG ATGCGGCGGG CCTCCCCGGC CTGGTGGCCG GTCTCGGCCC GGAGTGGGTC
GGGTTGTCCG TCACGATGCC CGGCAAGTTC GCGGCACTCG AGCTGGCCAC CGAGCGCACC
GATCGGGCCG TACGCGTGGG ATCGGCGAAC ACACTGGTTC GCATCGCCGA CGGCTGGCTC
GCCGACTGCA CCGACGTCGA TGGTGCCGCC GGACTTCTCG ACGAGTGCGG TGCGGCCGGT
TCGTCGGCCG TGGTCGTCGG CGCCGGCGGG ACGGCCCGGC CCGTGTTCGC CGCGCTCGCA
GCCCGCGGCT TCACCGACGT GTGTGTGCTG GCCCGCTCGC AGGACCGGGC GGCCGGCGCC
CTCGCCTGCG CGGACTCCTT CGGTCTCGCC GCTCGCTGGG CCCCCTTGCG CGCCGACGCC
GTGCCCGCGG CGGACGTTGT CGTCTCCACC CTGCCCGGTT CGGCGCAGCC CGAGGACTTC
CCGCTGGTCG ATGCGCTCAC ATCGGCGGCG CCCGCGGTCG CCGATGTGGC GTACGACCCG
TGGCCCACGC TGTTGGTCGC CGCGGCGGAC TCCAAGGGCG CACGGACTGC GGGTGGCCTG
ACGATGCTGC TGCATCAGGC GTTCCGGCAA ACGGAACTGT TCACCGGCGC GACCGCGCCG
CGCGCCGCGA TGGCTGCGGC GCTCGAGGAG CACAGGGAAC CGCAATGA
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| Protein sequence | MTSATPRRAA VVGKPVDHSL SPVLHNAAFR ALGLDWSYQR IECDAAGLPG LVAGLGPEWV
GLSVTMPGKF AALELATERT DRAVRVGSAN TLVRIADGWL ADCTDVDGAA GLLDECGAAG
SSAVVVGAGG TARPVFAALA ARGFTDVCVL ARSQDRAAGA LACADSFGLA ARWAPLRADA
VPAADVVVST LPGSAQPEDF PLVDALTSAA PAVADVAYDP WPTLLVAAAD SKGARTAGGL
TMLLHQAFRQ TELFTGATAP RAAMAAALEE HREPQ
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