Gene Tpau_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1977 
Symbol 
ID9156132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2066703 
End bp2067959 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content67% 
IMG OID 
Productaminodeoxychorismate lyase 
Protein accessionYP_003646928 
Protein GI296139685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.337407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGACG GGTGGCATTC CGACCGGGCC GAGCCGATGA CGGTCGGCGG TGGTTCCACT 
CGGCTCGAAC GTCGCCGTGC CGCGCGCCAG GCACAGATCA AGCGCCGCCG TCGGGTGGCG
CTGGCAGCGA TCCTGGTGAT CTTCCTGCTG ATCGTGGGCA CGATCGTGTG GACCATGCGG
CACACCCTGA TGGGAAGTGG TGCGAGTCCC GAGGATTACG CCTCGGGGAG CCCTGGCCCC
GCGGTGGTCG TGCACATCAC CGGCACGAAC AACTCCGACT TCGCCCAGAA CCTGGTCGAT
GCGGGCGTGG TGAAGTCCGT GGCCGCGTTC AACCAAGCGG CGGGCGATAA GCCCATCTCA
GCCGGGTACT ACGAACTGCG CAAGGCGATC CCCGCCGCCG AGGCGGTGGA CATGATCACC
GATCCGGCTC GGTCGCACCG GGTCGGCATG GTGAACGTGT CGGCGGGCGC GCAGCTCGAC
GACAAGCGCG GCAAGGACAA CAAGGTCGCT CGTGGCATCC TCAGCCAGAT CTCCGCGGCG
ACGGCGCACA CCAGCAACGG CGTGAAGACG CAGATCCCCG CCGCCGACTT CGTCCGGGTC
GCTGCGACGG CCAGTCCGTC CGACCTGGGC GTGCCACAGT GGGCGCTGGC CACGGTGAAC
CGGATGAAGG GCGATCACCG CCGCATCGAG GGTCTTATCG CGCCCGGAGT GTGGGAGGAG
GTCGACCCGT CGGGGACGCC CGTGTCGATT CTCAAGAGTC TGATCACGGC CTCGGCGAAG
CAGTACGAGG CGCAGGGCCT ACTCAGCGCG AGCCGTAGCT CGGCCGCGAA GCTCGACCCG
TACGAGGTGC TGGTCTCCGC GTCGATCGTC GAGCGTGAGG TGAACCAGCC CGCGGACTAC
CCGAAGGTTG CGCGCGTGAT CTTGAACCGG CTGGCGAAGA ACCAGAAGCT CGAGATGGAT
TCGACGGTCA ACTACACCGA AGCGGTCACC AGCATCGACG TCCGTGGTGA GCAATTGCTG
AAGAAGACGG AGTGGAACAC CTACGCCAAG ACGGGACTGC CCGCCACCCC GATCGGTGCG
GTGGGCACGT CGGCCCTGGT CGCCACGGAG AATCCCGCCC CGGGCCCGTG GTTGTACTTC
GTGACGGTCG ATGCGCAGGG CACCACGCAG TTCACCGACG ACTTCGCCCA GCATGAGCGC
AATCGGCAGA CCGCGTGCGA CAACAAGTTC CTCACCGTGG GGTGCGCGCC GAAGTGA
 
Protein sequence
MSDGWHSDRA EPMTVGGGST RLERRRAARQ AQIKRRRRVA LAAILVIFLL IVGTIVWTMR 
HTLMGSGASP EDYASGSPGP AVVVHITGTN NSDFAQNLVD AGVVKSVAAF NQAAGDKPIS
AGYYELRKAI PAAEAVDMIT DPARSHRVGM VNVSAGAQLD DKRGKDNKVA RGILSQISAA
TAHTSNGVKT QIPAADFVRV AATASPSDLG VPQWALATVN RMKGDHRRIE GLIAPGVWEE
VDPSGTPVSI LKSLITASAK QYEAQGLLSA SRSSAAKLDP YEVLVSASIV EREVNQPADY
PKVARVILNR LAKNQKLEMD STVNYTEAVT SIDVRGEQLL KKTEWNTYAK TGLPATPIGA
VGTSALVATE NPAPGPWLYF VTVDAQGTTQ FTDDFAQHER NRQTACDNKF LTVGCAPK