Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1963 |
Symbol | |
ID | 9156118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 2049773 |
End bp | 2051578 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_003646914 |
Protein GI | 296139671 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGCGCA CCCACCTTGC TGGATCGTTG CGAGCGGAGG ATGCCGGCAC CGTCGTCACC CTCACCGGCT GGGTCGCCCG CCGACGTGAC CACGGCGGCG TCATCTTCAT CGACCTGCGC GACAGCTCGG GTGTGGCGCA GGTGGTCTTC CGGGAGTCCG CGGTCGCCGA GCAGGCCCAC CGCCTGCGCT CCGAGTACTG CGTGCTGGTG ACCGGCACCG TCGAGAAGCG TCCCGAGGGC AGCGAGAACC CGAACCTGCC GTCCGGCGCG ATCGAGGTCA ACGTCACCGA CCTGACCGTG CTCAACGAGT CGGCGCCGCT GCCGTTCCAG CTCGATGAGG AGCCCGGTGA GGAAGCGCGC CTGAAGTACC GCTACCTGGA TCTGCGCCGC GAGGGCCCGG CGGCTGCGAT CAAGCTGCGC AGCCAGGCCA ATGCGGTGGC GCGCAACATC TTGGCGCTCA ACGACTTCAC CGAGATCGAG ACGCCGACGC TGACCCGGTC CACCCCGGAG GGCGCCCGCG ACTTCCTGGT GCCCGCGCGC CTGCGCCCCG GCACCTTCTA CGCGCTGCCG CAGAGCCCGC AGCTGTTCAA GCAGCTGCTC ATGGTCGCGG GCATGGAGCG GTATTACCAG ATCGCGCGCT GCTACCGCGA CGAGGACTTC CGCGCCGACC GGCAGCCCGA GTTCACCCAG CTCGACATCG AGATGAGCTT CGTGGACCAG GAGGACGTGA TCGCCCTCGG CGAGCAGATC GTCAAGGCGC TCTGGTCGCT CATCGGCCAC GAGATCCCCA CCCCGATCCC GCGCCTGACC TACGCCGAGG CGATGCGCCG CTTCGGCTCG GACAAGCCGG ACCTGCGCTT CGGGCTCGAA CTGGTCGAGT GCACCGAGTA CTTCTCCGGC ACCCCGTTCC GCGTCTTCCA GGCGCCGTAC GTCGGTGCGG TCGTCATGCC GGGCGGCGCG AGCCAGCCCC GCCGCCAGCT CGACGCCTGG CAGGAGTGGG CCAAGCAGCG CGGCGCCCGC GGCCTCGCGT ACGTGCTGAT CGGCGAGGAC GGCGAGCTCA CCGGCCCCGT CGCCAAGAAC CTCTCGGACG ACGAACGCGC CGGCCTCGCG GCCCATGTGG GTGCCCAGCC GGGCGACTGC GTCTTCTTCG CCGCCGGCCC CACCAAGACG ATGCGCGCCC TGCTCGGCGC GGCCCGCGGC GAGATCGCCG ACAAGCTGGG CCTGATCAAG GACGGCGACT GGGCCTTCAC CTGGGTCGTC GACGCCCCGT TGTTCGAGCC GGCCGACGAC GCCACCGCCT CGGGCGACGT GGCCGTGGGC GACGGCGCCT GGACGGCGGT GCACCACGCC TTCACCAGCC CCAAGCCCGA GTCGATCGAC ACCTTCGACA CCGATCCGGG CAGCGCCCTG GCCTACGCCT ACGACATCGT CTGCAACGGC AACGAGATCG GCGGCGGCTC GATCCGTATC CACCGCCGCG ACGTCCAGGA GCGCGTCTTC GCGATCATGG GCATCGACGA GGAGCAGGCC CGCGAGAAGT TCGGCTTCCT GCTCGACGCC TTCTCCTACG GCGCACCGCC GCACGGCGGC ATCGCCTTCG GCTGGGACCG TGTGGTCTCG CTGCTCGCCG GTGCGCCGTC GATCCGCGAA GTCATCGCGT TCCCGAAGTC GGGTGGTGGC GTCGACCCGC TCACGGACGC GCCCGCGGCG ATCACCGCGC AACAACGCCG TGAATCCGGC ATGGACGCCA AGCCCAAGGC CGCCGAGCCG AAGCCCGATC CGGCCGCCGC ACAGCCCACC GAGTAG
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Protein sequence | MLRTHLAGSL RAEDAGTVVT LTGWVARRRD HGGVIFIDLR DSSGVAQVVF RESAVAEQAH RLRSEYCVLV TGTVEKRPEG SENPNLPSGA IEVNVTDLTV LNESAPLPFQ LDEEPGEEAR LKYRYLDLRR EGPAAAIKLR SQANAVARNI LALNDFTEIE TPTLTRSTPE GARDFLVPAR LRPGTFYALP QSPQLFKQLL MVAGMERYYQ IARCYRDEDF RADRQPEFTQ LDIEMSFVDQ EDVIALGEQI VKALWSLIGH EIPTPIPRLT YAEAMRRFGS DKPDLRFGLE LVECTEYFSG TPFRVFQAPY VGAVVMPGGA SQPRRQLDAW QEWAKQRGAR GLAYVLIGED GELTGPVAKN LSDDERAGLA AHVGAQPGDC VFFAAGPTKT MRALLGAARG EIADKLGLIK DGDWAFTWVV DAPLFEPADD ATASGDVAVG DGAWTAVHHA FTSPKPESID TFDTDPGSAL AYAYDIVCNG NEIGGGSIRI HRRDVQERVF AIMGIDEEQA REKFGFLLDA FSYGAPPHGG IAFGWDRVVS LLAGAPSIRE VIAFPKSGGG VDPLTDAPAA ITAQQRRESG MDAKPKAAEP KPDPAAAQPT E
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