Gene Tpau_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1963 
Symbol 
ID9156118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2049773 
End bp2051578 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content71% 
IMG OID 
Productaspartyl-tRNA synthetase 
Protein accessionYP_003646914 
Protein GI296139671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGCGCA CCCACCTTGC TGGATCGTTG CGAGCGGAGG ATGCCGGCAC CGTCGTCACC 
CTCACCGGCT GGGTCGCCCG CCGACGTGAC CACGGCGGCG TCATCTTCAT CGACCTGCGC
GACAGCTCGG GTGTGGCGCA GGTGGTCTTC CGGGAGTCCG CGGTCGCCGA GCAGGCCCAC
CGCCTGCGCT CCGAGTACTG CGTGCTGGTG ACCGGCACCG TCGAGAAGCG TCCCGAGGGC
AGCGAGAACC CGAACCTGCC GTCCGGCGCG ATCGAGGTCA ACGTCACCGA CCTGACCGTG
CTCAACGAGT CGGCGCCGCT GCCGTTCCAG CTCGATGAGG AGCCCGGTGA GGAAGCGCGC
CTGAAGTACC GCTACCTGGA TCTGCGCCGC GAGGGCCCGG CGGCTGCGAT CAAGCTGCGC
AGCCAGGCCA ATGCGGTGGC GCGCAACATC TTGGCGCTCA ACGACTTCAC CGAGATCGAG
ACGCCGACGC TGACCCGGTC CACCCCGGAG GGCGCCCGCG ACTTCCTGGT GCCCGCGCGC
CTGCGCCCCG GCACCTTCTA CGCGCTGCCG CAGAGCCCGC AGCTGTTCAA GCAGCTGCTC
ATGGTCGCGG GCATGGAGCG GTATTACCAG ATCGCGCGCT GCTACCGCGA CGAGGACTTC
CGCGCCGACC GGCAGCCCGA GTTCACCCAG CTCGACATCG AGATGAGCTT CGTGGACCAG
GAGGACGTGA TCGCCCTCGG CGAGCAGATC GTCAAGGCGC TCTGGTCGCT CATCGGCCAC
GAGATCCCCA CCCCGATCCC GCGCCTGACC TACGCCGAGG CGATGCGCCG CTTCGGCTCG
GACAAGCCGG ACCTGCGCTT CGGGCTCGAA CTGGTCGAGT GCACCGAGTA CTTCTCCGGC
ACCCCGTTCC GCGTCTTCCA GGCGCCGTAC GTCGGTGCGG TCGTCATGCC GGGCGGCGCG
AGCCAGCCCC GCCGCCAGCT CGACGCCTGG CAGGAGTGGG CCAAGCAGCG CGGCGCCCGC
GGCCTCGCGT ACGTGCTGAT CGGCGAGGAC GGCGAGCTCA CCGGCCCCGT CGCCAAGAAC
CTCTCGGACG ACGAACGCGC CGGCCTCGCG GCCCATGTGG GTGCCCAGCC GGGCGACTGC
GTCTTCTTCG CCGCCGGCCC CACCAAGACG ATGCGCGCCC TGCTCGGCGC GGCCCGCGGC
GAGATCGCCG ACAAGCTGGG CCTGATCAAG GACGGCGACT GGGCCTTCAC CTGGGTCGTC
GACGCCCCGT TGTTCGAGCC GGCCGACGAC GCCACCGCCT CGGGCGACGT GGCCGTGGGC
GACGGCGCCT GGACGGCGGT GCACCACGCC TTCACCAGCC CCAAGCCCGA GTCGATCGAC
ACCTTCGACA CCGATCCGGG CAGCGCCCTG GCCTACGCCT ACGACATCGT CTGCAACGGC
AACGAGATCG GCGGCGGCTC GATCCGTATC CACCGCCGCG ACGTCCAGGA GCGCGTCTTC
GCGATCATGG GCATCGACGA GGAGCAGGCC CGCGAGAAGT TCGGCTTCCT GCTCGACGCC
TTCTCCTACG GCGCACCGCC GCACGGCGGC ATCGCCTTCG GCTGGGACCG TGTGGTCTCG
CTGCTCGCCG GTGCGCCGTC GATCCGCGAA GTCATCGCGT TCCCGAAGTC GGGTGGTGGC
GTCGACCCGC TCACGGACGC GCCCGCGGCG ATCACCGCGC AACAACGCCG TGAATCCGGC
ATGGACGCCA AGCCCAAGGC CGCCGAGCCG AAGCCCGATC CGGCCGCCGC ACAGCCCACC
GAGTAG
 
Protein sequence
MLRTHLAGSL RAEDAGTVVT LTGWVARRRD HGGVIFIDLR DSSGVAQVVF RESAVAEQAH 
RLRSEYCVLV TGTVEKRPEG SENPNLPSGA IEVNVTDLTV LNESAPLPFQ LDEEPGEEAR
LKYRYLDLRR EGPAAAIKLR SQANAVARNI LALNDFTEIE TPTLTRSTPE GARDFLVPAR
LRPGTFYALP QSPQLFKQLL MVAGMERYYQ IARCYRDEDF RADRQPEFTQ LDIEMSFVDQ
EDVIALGEQI VKALWSLIGH EIPTPIPRLT YAEAMRRFGS DKPDLRFGLE LVECTEYFSG
TPFRVFQAPY VGAVVMPGGA SQPRRQLDAW QEWAKQRGAR GLAYVLIGED GELTGPVAKN
LSDDERAGLA AHVGAQPGDC VFFAAGPTKT MRALLGAARG EIADKLGLIK DGDWAFTWVV
DAPLFEPADD ATASGDVAVG DGAWTAVHHA FTSPKPESID TFDTDPGSAL AYAYDIVCNG
NEIGGGSIRI HRRDVQERVF AIMGIDEEQA REKFGFLLDA FSYGAPPHGG IAFGWDRVVS
LLAGAPSIRE VIAFPKSGGG VDPLTDAPAA ITAQQRRESG MDAKPKAAEP KPDPAAAQPT
E