| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1942 |
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| Symbol | |
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| ID | 9156097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 2027200 |
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| End bp | 2028816 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_003646894 |
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| Protein GI | 296139651 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0269026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCAAGA CCTCATCGAG CCGTGACGGA AGCGGAGATC CGTGGAAGCC ACTCGCGTTC
TTCGGCGTGC TGCTCATCGC CGTGTTCGGC CTGATCTTCT TCACCGGCGA CAAGAAGCCC
GAGCCCAAGC TGGGCATCGA CCTGCAGGGC GGGACCTCGG TCACCCTGCA GGCCACGCGA
CCTGACGGCA CCGTGCCCGA CTCCAACTCA CCGGAGCTGG AGCAGGCCCG CGACATCATC
AACCAGCGCG TGAACGGCCT GGGTGTCGCC GGATCCGAGG TGAAGATCAA CGGCAGCAAC
CTGGTGATCA CCGTGCCCGG CGAGGACGGC GACCAGGCCC GCACACTGGG CCAGACCGCC
CGCCTGCTGG TGCGCCCGGT ACTCAGCGCG GTGCCGGCGA CGCCGCAACC GAATGCCCCG
GCGCCCGATC TCACCAATCC CGATACCGCG AAGAAGGCCC TGCTCGACGC GAAGGCGGCC
CGGCAGTCCA CCGATCCGGC GGCTCAGCAG AAGGCGGCCT CGCAGCTCAA CTGCGATGCC
ACCGATCCGC TCGCGGGTAA CGACGATCCG AAGCTGCCGC TGGTCACCTG CGGCAAGCTC
GAGAACGACC CGAAGAACCC GCAGCCGCGG ATGGTGTACA CGCTGGCCCC GTCGATCATC
GACGGCCAGT CGATCAAGAA CGCCAGTTCG GGCATTCCCC AGAACCAGGC GCAGTACGTG
GTCACGCTGG AGTTCACGGG CGACGCCGCC AAGGCGTGGG CCGACTACAC CTCGAACAAT
CGCGGGAAGC AGGCCGCCTT CGTCCTCGAC TCGCAGGTGA TCACCGCGCC GCAGATCAAC
GAGCCGATCA CCGGTGGTCA GACACAGATC TCCGGCAGCT TCAACCAGCA GTCCGCCGCC
GACCTCGCGA ACGTGCTGAA GTACGGCTCG CTGCCGCTGT CGTTCAAGGC CGGCACCGCG
CAGACGGTGA GCGCTACGCT CGGGTTCGAC TCGCTGCGCG CCGGCGTCAT CGCCGGCCTC
ATCGGACTGG TTCTGGTGCT GATCTACGCG CTCGCCTACT ACCGTGCGCT CGGCGTGCTG
GTGGCGTTGT CGCTGGTGCT GTCCATCGCG CTGCTGTACG GACTGCTGGT ATTGCTCGGA
CGGTGGATCG GCTACTCGCT CGACCTGTCC GGTATCGCCG GCATCATCAT CGGTATCGGC
ATGACCGCCG ACTCCTTCGT CGTCTACTTC GAACGCATTA AGGACGAGAT CCGCGACGGG
CGCAGTTTCC GCTCCGCCGT CCCGCGCGGC TGGGCCAGCG CCCGCCGCAC GATCTGGACC
GGCAACGCGG TGTCCCTGCT CTCCGCCGTG GTTCTGTACA TCCTCGCCGT CGGTGATGTC
CGCGGATTCG CGTTCACCCT CGGCCTGTCC ACCGTCCTCG ATGTGGTGAT CGTGTTCCTG
GTGACGCATC CCCTGGTGGT GCTGGCCTCC CGCACCGACT TCTTCGCCAA GCCGTCGATG
AACGGGCTCG GTGCGGTCGC AGCGATCGGT CGCGAGCGGC GCCGCGCGGT AGCGAACACG
GGTGCCACGG CCAAGGACGC GAGTACCGGC TCGAACGCAG GGGAGACGAA GGCATGA
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| Protein sequence | MAKTSSSRDG SGDPWKPLAF FGVLLIAVFG LIFFTGDKKP EPKLGIDLQG GTSVTLQATR
PDGTVPDSNS PELEQARDII NQRVNGLGVA GSEVKINGSN LVITVPGEDG DQARTLGQTA
RLLVRPVLSA VPATPQPNAP APDLTNPDTA KKALLDAKAA RQSTDPAAQQ KAASQLNCDA
TDPLAGNDDP KLPLVTCGKL ENDPKNPQPR MVYTLAPSII DGQSIKNASS GIPQNQAQYV
VTLEFTGDAA KAWADYTSNN RGKQAAFVLD SQVITAPQIN EPITGGQTQI SGSFNQQSAA
DLANVLKYGS LPLSFKAGTA QTVSATLGFD SLRAGVIAGL IGLVLVLIYA LAYYRALGVL
VALSLVLSIA LLYGLLVLLG RWIGYSLDLS GIAGIIIGIG MTADSFVVYF ERIKDEIRDG
RSFRSAVPRG WASARRTIWT GNAVSLLSAV VLYILAVGDV RGFAFTLGLS TVLDVVIVFL
VTHPLVVLAS RTDFFAKPSM NGLGAVAAIG RERRRAVANT GATAKDASTG SNAGETKA
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